RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ERCC3P19447 782 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 MAPK4P31152 587 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 USH1GQ495M9 461 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 WWC2Q6AWC2 1192 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 HEATR3Q7Z4Q2 680 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 COA7Q96BR5 231 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 DDX11Q96FC9 970 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 TRERF1Q96PN7 1200 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 PORCNQ9H237 461 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 SH3GLB2Q9NR46 395 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 FBXO40Q9UH90 709 aa19.06■□□□□ 0.64
CAPN1-205ENST00000526954 RBBP6Q7Z6E9 1792 aaKnown RBP19.06■□□□□ 0.64
CAPN1-205ENST00000526954 ZNFX1Q9P2E3 1918 aaKnown RBP19.06■□□□□ 0.64
CAPN1-205ENST00000526954 DTNBO60941 627 aa19.05■□□□□ 0.64
CAPN1-205ENST00000526954 ANP32AP39687 249 aaKnown RBP19.05■□□□□ 0.64
CAPN1-205ENST00000526954 SP3Q02447 781 aa19.05■□□□□ 0.64
CAPN1-205ENST00000526954 PPP1R18Q6NYC8 613 aa19.05■□□□□ 0.64
CAPN1-205ENST00000526954 NCAPG2Q86XI2 1143 aa19.05■□□□□ 0.64
CAPN1-205ENST00000526954 RGS22Q8NE09 1264 aa19.05■□□□□ 0.64
CAPN1-205ENST00000526954 CLEC4DQ8WXI8 215 aa19.05■□□□□ 0.64
CAPN1-205ENST00000526954 GPKOWQ92917 476 aaPredicted RBP eCLIP19.05■□□□□ 0.64
CAPN1-205ENST00000526954 ACAD9Q9H845 621 aa19.05■□□□□ 0.64
CAPN1-205ENST00000526954 RNF146Q9NTX7 359 aa19.05■□□□□ 0.64
CAPN1-205ENST00000526954 SMC3Q9UQE7 1217 aa19.05■□□□□ 0.64
CAPN1-205ENST00000526954 TAL1P17542 331 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-205ENST00000526954 SLC4A3P48751 1232 aa19.04■□□□□ 0.64
CAPN1-205ENST00000526954 LACTBP83111 547 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-205ENST00000526954 MUM1L1Q5H9M0 696 aa19.04■□□□□ 0.64
CAPN1-205ENST00000526954 TEX2Q8IWB9 1127 aa19.04■□□□□ 0.64
CAPN1-205ENST00000526954 DOCK3Q8IZD9 2030 aa19.04■□□□□ 0.64
CAPN1-205ENST00000526954 SAMD3Q8N6K7 520 aa19.04■□□□□ 0.64
CAPN1-205ENST00000526954 CCDC12Q8WUD4 166 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-205ENST00000526954 EFCC1Q9HA90 598 aa19.04■□□□□ 0.64
CAPN1-205ENST00000526954 HOMER2Q9NSB8 354 aa19.04■□□□□ 0.64
CAPN1-205ENST00000526954 KIF3AQ9Y496 699 aa19.04■□□□□ 0.64
CAPN1-205ENST00000526954 PLXNB2O15031 1838 aa19.04■□□□□ 0.64
CAPN1-205ENST00000526954 ESYT2A0FGR8 921 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 OPLAHO14841 1288 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 STRNO43815 780 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 GJB2P29033 226 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 NAPAP54920 295 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 GHRHRQ02643 423 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 TYW1BQ6NUM6 668 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 MCF2L2Q86YR7 1114 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 CCAR1Q8IX12 1150 aaKnown RBP19.03■□□□□ 0.64
CAPN1-205ENST00000526954 FAM184AQ8NB25 1140 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 AIFM3Q96NN9 605 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 ALG1Q9BT22 464 aa19.03■□□□□ 0.64
CAPN1-205ENST00000526954 NFIBO00712 420 aa19.02■□□□□ 0.64
CAPN1-205ENST00000526954 FKTNO75072 461 aa19.02■□□□□ 0.64
CAPN1-205ENST00000526954 XBP1P17861 261 aa19.02■□□□□ 0.64
CAPN1-205ENST00000526954 ABRAQ8N0Z2 381 aa19.02■□□□□ 0.64
CAPN1-205ENST00000526954 CCDC148Q8NFR7 591 aa19.02■□□□□ 0.64
CAPN1-205ENST00000526954 SHISA4Q96DD7 197 aa19.02■□□□□ 0.64
CAPN1-205ENST00000526954 ZMYND12Q9H0C1 365 aa19.02■□□□□ 0.64
CAPN1-205ENST00000526954 MAP3K20Q9NYL2 800 aaKnown RBP19.02■□□□□ 0.64
CAPN1-205ENST00000526954 VPS54Q9P1Q0 977 aa19.02■□□□□ 0.64
CAPN1-205ENST00000526954 ZNF236Q9UL36 1845 aa19.02■□□□□ 0.63
CAPN1-205ENST00000526954 HSP90AA1P07900 732 aaKnown RBP19.01■□□□□ 0.63
CAPN1-205ENST00000526954 KIF22Q14807 665 aa19.01■□□□□ 0.63
CAPN1-205ENST00000526954 GPR142Q7Z601 462 aa19.01■□□□□ 0.63
CAPN1-205ENST00000526954 PLEKHH3Q7Z736 793 aa19.01■□□□□ 0.63
CAPN1-205ENST00000526954 GLT8D2Q9H1C3 349 aa19.01■□□□□ 0.63
CAPN1-205ENST00000526954 A1CFQ9NQ94 594 aaKnown RBP19.01■□□□□ 0.63
CAPN1-205ENST00000526954 TSKSQ9UJT2 592 aa19.01■□□□□ 0.63
CAPN1-205ENST00000526954 ZSWIM8A7E2V4 1837 aa19.01■□□□□ 0.63
CAPN1-205ENST00000526954 SMCO2A6NFE2 343 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 PIK3CDO00329 1044 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 FCER1AP12319 257 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 PTPREP23469 700 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 CTGFP29279 349 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 PSMC4P43686 418 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 HSD17B4P51659 736 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 FCGRTP55899 365 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 GALNT17Q6IS24 598 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 ZNF296Q8WUU4 475 aaPredicted RBP19■□□□□ 0.63
CAPN1-205ENST00000526954 ERO1AQ96HE7 468 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 MMP19Q99542 508 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 PHF20Q9BVI0 1012 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 PSTPIP2Q9H939 334 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 C6orf50Q9HD87 102 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 RIC8AQ9NPQ8 531 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 IVNS1ABPQ9Y6Y0 642 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 PFASO15067 1338 aa19■□□□□ 0.63
CAPN1-205ENST00000526954 SLC15A5A6NIM6 579 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 GNA11P29992 359 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 MRPL12P52815 198 aaKnown RBP18.99■□□□□ 0.63
CAPN1-205ENST00000526954 GRB14Q14449 540 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 KCTD2Q14681 263 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 MORN1Q5T089 497 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 WDR78Q5VTH9 848 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 TBC1D5Q92609 795 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 CUL5Q93034 780 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 TRIM47Q96LD4 638 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 ARHGAP39Q9C0H5 1083 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 CWC22Q9HCG8 908 aaKnown RBP18.99■□□□□ 0.63
CAPN1-205ENST00000526954 FOXD4L1Q9NU39 408 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 CYP39A1Q9NYL5 469 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 LCTP09848 1927 aa18.99■□□□□ 0.63
CAPN1-205ENST00000526954 DNAJC25-GNG10A0A024R161 153 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms