RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ANKLE1Q8NAG6 615 aa14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 FAM184AQ8NB25 1140 aa14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 REPS2Q8NFH8 660 aa14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 PAWRQ96IZ0 340 aaKnown RBP14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 NUP88Q99567 741 aaPredicted RBP14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 MROH8Q9H579 483 aa14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 OGDHLQ9ULD0 1010 aa14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 PPP1R9AQ9ULJ8 1098 aa14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 IVNS1ABPQ9Y6Y0 642 aa14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 ZNF236Q9UL36 1845 aa14.7□□□□□ -0.06
SSSCA1-203ENST00000526877 MYH6P13533 1939 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 ALPK3Q96L96 1907 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 COBLO75128 1261 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 SLC34A2O95436 690 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 NDUFB10O96000 172 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 PDIA4P13667 645 aaKnown RBP14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 PDCP20941 246 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 CDC27P30260 824 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 ADD1P35611 737 aaKnown RBP14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 GNAQP50148 359 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 NUCB2P80303 420 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 NSUN7Q8NE18 718 aaKnown RBP14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 SMARCC2Q8TAQ2 1214 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 DIS3LQ8TF46 1054 aaKnown RBP14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 DPF3Q92784 378 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 HTATIP2Q9BUP3 242 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 SYNPO2Q9UMS6 1093 aa14.69□□□□□ -0.06
SSSCA1-203ENST00000526877 PTPDC1A2A3K4 754 aa14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 JAK2O60674 1132 aa14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 CTDNEP1O95476 244 aa14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 ADORA2AP29274 412 aa14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 DDIT3P35638 169 aa14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 SSRP1Q08945 709 aaKnown RBP14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 PLS1Q14651 629 aa14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 GRM4Q14833 912 aa14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 ABRAQ8N0Z2 381 aa14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 FAM217BQ9NTX9 383 aaPredicted RBP14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 ZNF214Q9UL59 606 aaPredicted RBP14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 MTMR7Q9Y216 660 aa14.68□□□□□ -0.06
SSSCA1-203ENST00000526877 RAD21O60216 631 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 SLC25A27O95847 323 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 PARP1P09874 1014 aaKnown RBP14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 IFNAR1P17181 557 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 CYP2C19P33261 490 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 STAT3P40763 770 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 AKAP17AQ02040 695 aaKnown RBP14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 MFSD14CQ5VZR4 134 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 LARP1BQ659C4 914 aaKnown RBP14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 DPP9Q86TI2 863 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 NCAPG2Q86XI2 1143 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 RIOX2Q8IUF8 465 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 TRIM22Q8IYM9 498 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 LRRC47Q8N1G4 583 aaKnown RBP14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 GMCL1P1Q8NEA9 526 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 TRPV1Q8NER1 839 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 DDX11Q96FC9 970 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 LZTS2Q9BRK4 669 aa14.67□□□□□ -0.06
SSSCA1-203ENST00000526877 TRIOBPQ9H2D6 2365 aa14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 NTRK3Q16288 839 aa14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 HABP4Q5JVS0 413 aaKnown RBP14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 OLFML2BQ68BL8 750 aa14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 NECAB2Q7Z6G3 386 aa14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 PRPF38AQ8NAV1 312 aaKnown RBP14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 WASF1Q92558 559 aa14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 SLF1Q9BQI6 1058 aa14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 ORC3Q9UBD5 711 aaPredicted RBP14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 FRMPD3Q5JV73 1810 aa14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 STK36Q9NRP7 1315 aa14.66□□□□□ -0.06
SSSCA1-203ENST00000526877 SMCHD1A6NHR9 2005 aa14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 ATP2A1O14983 1001 aa14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 COL6A1P12109 1028 aa14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 FCER1AP12319 257 aa14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 ASPRV1Q53RT3 343 aa14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 TMTC3Q6ZXV5 915 aa14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 SLC26A6Q9BXS9 759 aa14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 MAD2L2Q9UI95 211 aa14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 COLQQ9Y215 455 aaPredicted RBP14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 RIPK3Q9Y572 518 aa14.65□□□□□ -0.06
SSSCA1-203ENST00000526877 PLXNA1Q9UIW2 1896 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 PALM3A6NDB9 673 aaPredicted RBP14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 STX6O43752 255 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 DTNBO60941 627 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 PDHBP11177 359 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 CYBAP13498 195 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 SYT1P21579 422 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 SMARCA1P28370 1054 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 SLFN13Q68D06 897 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 CCDC82Q8N4S0 544 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 DCAF4Q8WV16 495 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 PHKBQ93100 1093 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 MAML3Q96JK9 1138 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 RNF26Q9BY78 433 aaPredicted RBP14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 RBM27Q9P2N5 1060 aaKnown RBP14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 FEM1BQ9UK73 627 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 PFASO15067 1338 aa14.64□□□□□ -0.07
SSSCA1-203ENST00000526877 KLRF2D3W0D1 207 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 H3BQV1 296 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 PRPF3O43395 683 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 PPFIA3O75145 1194 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms