RNA–Protein interactions for RNA: ENST00000526131.1

AP004247.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP004247.2, Length 1,890 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.2-201ENST00000526131 CD99L2Q8TCZ2 262 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 TRERF1Q96PN7 1200 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 AMNQ9BXJ7 453 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 RBM19Q9Y4C8 960 aaKnown RBP12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 GPR25O00155 361 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 NFIBO00712 420 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 FOXN1O15353 648 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 FMNL1O95466 1100 aaPredicted RBP12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 BCRP11274 1271 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 SCG2P13521 617 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 NAPAP54920 295 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 SP3Q02447 781 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 FAM184AQ8NB25 1140 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 ZNF296Q8WUU4 475 aaPredicted RBP12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 SNX21Q969T3 373 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 RNF26Q9BY78 433 aaPredicted RBP12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 SMC3Q9UQE7 1217 aa12.8□□□□□ -0.36
AP004247.2-201ENST00000526131 CFBP00751 764 aa12.79□□□□□ -0.36
AP004247.2-201ENST00000526131 GJB2P29033 226 aa12.79□□□□□ -0.36
AP004247.2-201ENST00000526131 CTGFP29279 349 aa12.79□□□□□ -0.36
AP004247.2-201ENST00000526131 CCNA1P78396 465 aa12.79□□□□□ -0.36
AP004247.2-201ENST00000526131 PKN1Q16512 942 aa12.79□□□□□ -0.36
AP004247.2-201ENST00000526131 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
AP004247.2-201ENST00000526131 ALG1Q9BT22 464 aa12.79□□□□□ -0.36
AP004247.2-201ENST00000526131 TNPO2O14787 897 aaKnown RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 PRPF3O43395 683 aaKnown RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 DEXIO95424 95 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 PGK2P07205 417 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 FDPSP14324 419 aaKnown RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 CALML3P27482 149 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 HOXA13P31271 388 aaPredicted RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 PSMC4P43686 418 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 CAP1Q01518 475 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 PFKFB3Q16875 520 aaPredicted RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 TYW1BQ6NUM6 668 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 TBC1D5Q92609 795 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 MTMR8Q96EF0 704 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 KCNJ14Q9UNX9 436 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 HTTP42858 3142 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 RBBP6Q7Z6E9 1792 aaKnown RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 LBX1P52954 281 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 LACTBP83111 547 aaPredicted RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 BECN1Q14457 450 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 KIF22Q14807 665 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 UBE2SQ16763 222 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 GPR142Q7Z601 462 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 RIOX2Q8IUF8 465 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 MMP19Q99542 508 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 SAGE1Q9NXZ1 904 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 MORF4L1Q9UBU8 362 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 DDX49Q9Y6V7 483 aaKnown RBP12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 IVNS1ABPQ9Y6Y0 642 aa12.78□□□□□ -0.36
AP004247.2-201ENST00000526131 STXBP3O00186 592 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 FDX1P10109 184 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 SMARCA1P28370 1054 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 SLC30A10Q6XR72 485 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 FCHSD1Q86WN1 690 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 JMYQ8N9B5 988 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 TRIM47Q96LD4 638 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 ACAD9Q9H845 621 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 DAXXQ9UER7 740 aaPredicted RBP12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 BRCA2P51587 3418 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 MCM3APO60318 1980 aa12.77□□□□□ -0.37
AP004247.2-201ENST00000526131 ADAMTS3O15072 1205 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 FKTNO75072 461 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 OAZ1P54368 228 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 NLRP5P59047 1200 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 KCTD2Q14681 263 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 USP17L6PQ6QN14 398 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 SHISA4Q96DD7 197 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 PGBD1Q96JS3 809 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 ABCB11O95342 1321 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 SMCO2A6NFE2 343 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 SLC25A27O95847 323 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 FCER1AP12319 257 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 FCGRTP55899 365 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 UBXN2AP68543 259 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 FOXD4L5Q5VV16 416 aaPredicted RBP12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 RNF207Q6ZRF8 634 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 PLEKHH3Q7Z736 793 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 RASGRP4Q8TDF6 673 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 CLEC4DQ8WXI8 215 aa12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 FOXD4L4Q8WXT5 416 aaPredicted RBP12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 LLPHQ9BRT6 129 aaKnown RBP12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 A1CFQ9NQ94 594 aaKnown RBP12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 MRPL11Q9Y3B7 192 aaKnown RBP12.76□□□□□ -0.37
AP004247.2-201ENST00000526131 OPLAHO14841 1288 aa12.75□□□□□ -0.37
AP004247.2-201ENST00000526131 ATP2A1O14983 1001 aa12.75□□□□□ -0.37
AP004247.2-201ENST00000526131 CYP2B6P20813 491 aa12.75□□□□□ -0.37
AP004247.2-201ENST00000526131 ADORA2AP29274 412 aa12.75□□□□□ -0.37
AP004247.2-201ENST00000526131 MAPK4P31152 587 aa12.75□□□□□ -0.37
AP004247.2-201ENST00000526131 ADCY7P51828 1080 aa12.75□□□□□ -0.37
AP004247.2-201ENST00000526131 RPS6P62753 249 aaKnown RBP12.75□□□□□ -0.37
AP004247.2-201ENST00000526131 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
AP004247.2-201ENST00000526131 CNTN2Q02246 1040 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms