RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 PPP1R1BQ9UD71 204 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-211ENST00000525821 HFM1A2PYH4 1435 aa9.22□□□□□ -0.93
CTNND1-211ENST00000525821 NAIPQ13075 1403 aa9.22□□□□□ -0.93
CTNND1-211ENST00000525821 NEXMIFQ5QGS0 1516 aa9.21□□□□□ -0.93
CTNND1-211ENST00000525821 CHMP4BP1P59074 171 aa9.21□□□□□ -0.94
CTNND1-211ENST00000525821 UBE2FQ969M7 185 aa9.21□□□□□ -0.94
CTNND1-211ENST00000525821 CNNM2Q9H8M5 875 aa9.21□□□□□ -0.94
CTNND1-211ENST00000525821 BTG4Q9NY30 223 aa9.21□□□□□ -0.94
CTNND1-211ENST00000525821 LMCD1Q9NZU5 365 aa9.21□□□□□ -0.94
CTNND1-211ENST00000525821 ZSWIM5Q9P217 1185 aa9.21□□□□□ -0.94
CTNND1-211ENST00000525821 KCNH3Q9ULD8 1083 aa9.21□□□□□ -0.94
CTNND1-211ENST00000525821 ZP2Q05996 745 aa9.2□□□□□ -0.94
CTNND1-211ENST00000525821 SLC23A3Q6PIS1 610 aa9.2□□□□□ -0.94
CTNND1-211ENST00000525821 TMEM40Q8WWA1 233 aa9.2□□□□□ -0.94
CTNND1-211ENST00000525821 ANTXR1Q9H6X2 564 aa9.2□□□□□ -0.94
CTNND1-211ENST00000525821 MBNL3Q9NUK0 354 aaKnown RBP9.2□□□□□ -0.94
CTNND1-211ENST00000525821 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-211ENST00000525821 PLEKHH1Q9ULM0 1364 aa9.2□□□□□ -0.94
CTNND1-211ENST00000525821 SPHKAPQ2M3C7 1700 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.19□□□□□ -0.94
CTNND1-211ENST00000525821 LRRN2O75325 713 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 UBOX5O94941 541 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 RNASE1P07998 156 aaKnown RBP9.19□□□□□ -0.94
CTNND1-211ENST00000525821 PAK2Q13177 524 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 NLRC3Q7RTR2 1065 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 DTWD2Q8NBA8 298 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 ASPNQ9BXN1 380 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 PODXL2Q9NZ53 605 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 ADAMTS6Q9UKP5 1117 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 IQGAP3Q86VI3 1631 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 USP32Q8NFA0 1604 aa9.19□□□□□ -0.94
CTNND1-211ENST00000525821 CCDC144AA2RUR9 1427 aa9.18□□□□□ -0.94
CTNND1-211ENST00000525821 DISP2A7MBM2 1401 aa9.18□□□□□ -0.94
CTNND1-211ENST00000525821 MEIS3P2A8K0S8 358 aa9.18□□□□□ -0.94
CTNND1-211ENST00000525821 NME1P15531 152 aaKnown RBP9.18□□□□□ -0.94
CTNND1-211ENST00000525821 TNS3Q68CZ2 1445 aa9.18□□□□□ -0.94
CTNND1-211ENST00000525821 VWCEQ96DN2 955 aa9.18□□□□□ -0.94
CTNND1-211ENST00000525821 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.18□□□□□ -0.94
CTNND1-211ENST00000525821 DUSP15Q9H1R2 295 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-211ENST00000525821 ZNRF3Q9ULT6 936 aa9.18□□□□□ -0.94
CTNND1-211ENST00000525821 CDC42BPGQ6DT37 1551 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 PRAG1Q86YV5 1406 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 IMPDH2P12268 514 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 CCNFP41002 786 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 TMEM132EQ6IEE7 984 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 ZNF428Q96B54 188 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 FERD3LQ96RJ6 166 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 GPR62Q9BZJ7 368 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 TRIT1Q9H3H1 467 aaKnown RBP9.17□□□□□ -0.94
CTNND1-211ENST00000525821 CARS2Q9HA77 564 aaKnown RBP9.17□□□□□ -0.94
CTNND1-211ENST00000525821 RC3H2Q9HBD1 1191 aaKnown RBP9.17□□□□□ -0.94
CTNND1-211ENST00000525821 SPON1Q9HCB6 807 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 PRDM7Q9NQW5 492 aa9.17□□□□□ -0.94
CTNND1-211ENST00000525821 MARF1Q9Y4F3 1742 aaKnown RBP9.17□□□□□ -0.94
CTNND1-211ENST00000525821 SPATA31A5Q5VU36 1347 aa9.16□□□□□ -0.94
CTNND1-211ENST00000525821 SPATA31A7Q8IWB4 1347 aa9.16□□□□□ -0.94
CTNND1-211ENST00000525821 KCNQ2O43526 872 aa9.16□□□□□ -0.94
CTNND1-211ENST00000525821 SRFP11831 508 aa9.16□□□□□ -0.94
CTNND1-211ENST00000525821 POLR2BP30876 1174 aaKnown RBP9.16□□□□□ -0.94
CTNND1-211ENST00000525821 COL9A2Q14055 689 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-211ENST00000525821 TMPRSS7Q7RTY8 843 aa9.16□□□□□ -0.94
CTNND1-211ENST00000525821 SPATA32Q96LK8 384 aa9.16□□□□□ -0.94
CTNND1-211ENST00000525821 GPATCH2Q9NW75 528 aa9.16□□□□□ -0.94
CTNND1-211ENST00000525821 ROCK1Q13464 1354 aa9.15□□□□□ -0.94
CTNND1-211ENST00000525821 TNFRSF10CO14798 259 aa9.15□□□□□ -0.94
CTNND1-211ENST00000525821 TPP2P29144 1249 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-211ENST00000525821 C1QTNF8P60827 252 aa9.15□□□□□ -0.94
CTNND1-211ENST00000525821 RNF4P78317 190 aa9.15□□□□□ -0.94
CTNND1-211ENST00000525821 RAD51AP2Q09MP3 1159 aa9.15□□□□□ -0.94
CTNND1-211ENST00000525821 NBPF8Q3BBV2 869 aa9.15□□□□□ -0.94
CTNND1-211ENST00000525821 PMFBP1Q8TBY8 1022 aa9.15□□□□□ -0.94
CTNND1-211ENST00000525821 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
CTNND1-211ENST00000525821 CLTCL1P53675 1640 aa9.15□□□□□ -0.94
CTNND1-211ENST00000525821 ADGRF5Q8IZF2 1346 aa9.14□□□□□ -0.95
CTNND1-211ENST00000525821 WASH4PA8MWX3 477 aa9.14□□□□□ -0.95
CTNND1-211ENST00000525821 NBPF12Q5TAG4 269 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-211ENST00000525821 INTS3Q68E01 1043 aaKnown RBP9.14□□□□□ -0.95
CTNND1-211ENST00000525821 LRRN4CLQ8ND94 238 aa9.14□□□□□ -0.95
CTNND1-211ENST00000525821 RASGRP4Q8TDF6 673 aa9.14□□□□□ -0.95
CTNND1-211ENST00000525821 GPRASP2Q96D09 838 aa9.14□□□□□ -0.95
CTNND1-211ENST00000525821 GINM1Q9NU53 330 aa9.14□□□□□ -0.95
CTNND1-211ENST00000525821 PPT2Q9UMR5 302 aa9.14□□□□□ -0.95
CTNND1-211ENST00000525821 SBNO1A3KN83 1393 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 NINLQ9Y2I6 1382 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 BIN1O00499 593 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 CLEC3AO75596 197 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 ESR1P03372 595 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 ITGB5P18084 799 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 SAFB2Q14151 953 aaKnown RBP eCLIP9.13□□□□□ -0.95
CTNND1-211ENST00000525821 FBXW10Q5XX13 1052 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 TSPYL5Q86VY4 417 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-211ENST00000525821 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-211ENST00000525821 SLC9A7Q96T83 725 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 PDGFDQ9GZP0 370 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-211ENST00000525821 USP35Q9P2H5 1018 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 EFR3BQ9Y2G0 817 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 UTRNP46939 3433 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 PLCH1Q4KWH8 1693 aa9.13□□□□□ -0.95
CTNND1-211ENST00000525821 ARHGEF10O15013 1369 aa9.12□□□□□ -0.95
CTNND1-211ENST00000525821 RPGRIP1LQ68CZ1 1315 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms