RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 GSTM1P09488 218 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 ITGA4P13612 1032 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 ANKS3Q6ZW76 656 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 AMIGO3Q86WK7 504 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 FIBCD1Q8N539 461 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 PMFBP1Q8TBY8 1022 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 JMJD8Q96S16 334 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 ACTR10Q9NZ32 417 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 PRKAG3Q9UGI9 489 aa5.89□□□□□ -1.47
CD44-219ENST00000525685 A0A1W2PQH9 124 aa5.88□□□□□ -1.47
CD44-219ENST00000525685 PRKCAP17252 672 aa5.88□□□□□ -1.47
CD44-219ENST00000525685 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
CD44-219ENST00000525685 LAPTM5Q13571 262 aa5.88□□□□□ -1.47
CD44-219ENST00000525685 SOGA3Q5TF21 947 aa5.88□□□□□ -1.47
CD44-219ENST00000525685 CIAPIN1Q6FI81 312 aa5.88□□□□□ -1.47
CD44-219ENST00000525685 NUP43Q8NFH3 380 aa5.88□□□□□ -1.47
CD44-219ENST00000525685 DNAJC2Q99543 621 aaKnown RBP5.88□□□□□ -1.47
CD44-219ENST00000525685 HAUS7Q99871 368 aa5.88□□□□□ -1.47
CD44-219ENST00000525685 NOL6Q9H6R4 1146 aaKnown RBP5.88□□□□□ -1.47
CD44-219ENST00000525685 PHAXQ9H814 394 aaKnown RBP5.88□□□□□ -1.47
CD44-219ENST00000525685 IMPACTQ9P2X3 320 aa5.88□□□□□ -1.47
CD44-219ENST00000525685 MBD1Q9UIS9 605 aaPredicted RBP5.88□□□□□ -1.47
CD44-219ENST00000525685 SHROOM4Q9ULL8 1493 aa5.88□□□□□ -1.47
CD44-219ENST00000525685 FGF10O15520 208 aaPredicted RBP5.87□□□□□ -1.47
CD44-219ENST00000525685 NUAK1O60285 661 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 DDAH1O94760 285 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 VIPR1P32241 457 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 ARL4AP40617 200 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 NOP2P46087 812 aaKnown RBP5.87□□□□□ -1.47
CD44-219ENST00000525685 CYP4F8P98187 520 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 TCEAL1Q15170 157 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 GNPTABQ3T906 1256 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 HLA-DQA1Q5Y7H0 255 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 FAM169BQ8N8A8 192 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 NAT16Q8N8M0 369 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 UBXN4Q92575 508 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 FCRL3Q96P31 734 aaPredicted RBP5.87□□□□□ -1.47
CD44-219ENST00000525685 KLHL25Q9H0H3 589 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 TNFRSF12AQ9NP84 129 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 WHRNQ9P202 907 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 KLHL14Q9P2G3 628 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 PCDHB10Q9UN67 800 aa5.87□□□□□ -1.47
CD44-219ENST00000525685 SF3B6Q9Y3B4 125 aaKnown RBP5.87□□□□□ -1.47
CD44-219ENST00000525685 ABLIM1O14639 778 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 MPOP05164 745 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 IFNGR1P15260 489 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 MVKQ03426 396 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 FXNQ16595 210 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 CYP2R1Q6VVX0 501 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 HNRNPLLQ8WVV9 542 aaKnown RBP5.86□□□□□ -1.47
CD44-219ENST00000525685 KLHL6Q8WZ60 621 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 ARMC5Q96C12 935 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 ZDHHC15Q96MV8 337 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 IRF2BPLQ9H1B7 796 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 CNTD2Q9H8S5 307 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 ST7Q9NRC1 585 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 SIRT5Q9NXA8 310 aa5.86□□□□□ -1.47
CD44-219ENST00000525685 DIS3Q9Y2L1 958 aaKnown RBP5.86□□□□□ -1.47
CD44-219ENST00000525685 CCDC85CA6NKD9 419 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 EPHX1P07099 455 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 CD3EP07766 207 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 MSL3P1P0C860 447 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 EPHB3P54753 998 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 CASP7P55210 303 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 SLC7A5Q01650 507 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 POU4F1Q01851 419 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 SSPNQ14714 243 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 RAB3GAP1Q15042 981 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 OLFML2BQ68BL8 750 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 HEATR6Q6AI08 1181 aaKnown RBP5.85□□□□□ -1.47
CD44-219ENST00000525685 VHLLQ6RSH7 139 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 CNOT6Q9ULM6 557 aaKnown RBP5.85□□□□□ -1.47
CD44-219ENST00000525685 KCTD3Q9Y597 815 aa5.85□□□□□ -1.47
CD44-219ENST00000525685 N4BP3O15049 544 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 PPP2R5DQ14738 602 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 CBX2Q14781 532 aaPredicted RBP5.84□□□□□ -1.47
CD44-219ENST00000525685 ADAT2Q7Z6V5 191 aaKnown RBP5.84□□□□□ -1.47
CD44-219ENST00000525685 ADCY4Q8NFM4 1077 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 PPP1R14AQ96A00 147 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 SIGLEC10Q96LC7 697 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 FGD4Q96M96 766 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 PTCHD1Q96NR3 888 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 MCMBPQ9BTE3 642 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 GBP3Q9H0R5 595 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 SUSD2Q9UGT4 822 aa5.84□□□□□ -1.47
CD44-219ENST00000525685 NUDT19A8MXV4 375 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 IRS4O14654 1257 aaPredicted RBP5.83□□□□□ -1.48
CD44-219ENST00000525685 CDR1P51861 262 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 TMEM62Q0P6H9 643 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 NCAPHQ15003 741 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 ZNF385BQ569K4 471 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 RCSD1Q6JBY9 416 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 KIAA1211LQ6NV74 962 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 RPTNQ6XPR3 784 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 TMC6Q7Z403 805 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 JAMLQ86YT9 394 aa5.83□□□□□ -1.48
CD44-219ENST00000525685 A0A1W2PQ27 194 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 A0A1W2PQ64 194 aa5.82□□□□□ -1.48
CD44-219ENST00000525685 A0A1W2PQC6 194 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms