RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 ORC4O43929 436 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 FGRP09769 529 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 NKX3-2P78367 333 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 TNFAIP2Q03169 654 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 ALX1Q15699 326 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 TMEM63BQ5T3F8 832 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 TTBK2Q6IQ55 1244 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 FAM126BQ8IXS8 530 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 COL25A1Q9BXS0 654 aaPredicted RBP13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 PDGFCQ9NRA1 345 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 HELLSQ9NRZ9 838 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 CYP39A1Q9NYL5 469 aa13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
NDUFS3-204ENST00000525378 FGAP02671 866 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 SMPD1P17405 629 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 SLC16A2P36021 539 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 CCDC96Q2M329 555 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 RRP12Q5JTH9 1297 aaKnown RBP13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 MFSD5Q6N075 450 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 NSMFQ6X4W1 530 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 NOL8Q76FK4 1167 aaKnown RBP13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 C16orf59Q7L2K0 433 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 EEPD1Q7L9B9 569 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 ZNF589Q86UQ0 364 aaPredicted RBP13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 FBXO16Q8IX29 292 aaPredicted RBP13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 MAFAQ8NHW3 353 aaPredicted RBP13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 DCAF4Q8WV16 495 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 PPP1R12CQ9BZL4 782 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 RANBP17Q9H2T7 1088 aaKnown RBP13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 TOMM22Q9NS69 142 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 CCPG1Q9ULG6 757 aa13.87□□□□□ -0.19
NDUFS3-204ENST00000525378 MYH6P13533 1939 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 EYSQ5T1H1 3165 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 CD4P01730 458 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 ICAM1P05362 532 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 HSPD1P10809 573 aaKnown RBP13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 CSF2RAP15509 400 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 HDAC1Q13547 482 aaPredicted RBP13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 MCMDC2Q4G0Z9 681 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 TMEM240Q5SV17 173 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 TAPT1Q6NXT6 567 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 CXCL17Q6UXB2 119 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 TLK2Q86UE8 772 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 TMEM47Q9BQJ4 181 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 UNC80Q8N2C7 3258 aa13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 FRMPD2Q68DX3 1309 aaPredicted RBP13.86□□□□□ -0.19
NDUFS3-204ENST00000525378 LAMA4Q16363 1823 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 TMEM265A0A087WTH1 108 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 TLR3O15455 904 aaKnown RBP13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 DYNC1LI2O43237 492 aaPredicted RBP13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 ACRP10323 421 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 DNAJB2P25686 324 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 HAND2P61296 217 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 NMIQ13287 307 aaPredicted RBP13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 PPIGQ13427 754 aaKnown RBP eCLIP13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 SYDE2Q5VT97 1194 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 BTNL9Q6UXG8 535 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 SLC43A3Q8NBI5 491 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 GPCPD1Q9NPB8 672 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 GRIN2DO15399 1336 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 SCN5AQ14524 2016 aa13.85□□□□□ -0.19
NDUFS3-204ENST00000525378 GRXCR1A8MXD5 290 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 NFIBO00712 420 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 TOP1P11387 765 aaKnown RBP13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 FOSL2P15408 326 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 CYP2C18P33260 490 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 BAATQ14032 418 aaPredicted RBP13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 GRIN2CQ14957 1233 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 FSCN1Q16658 493 aaKnown RBP13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 IQSEC1Q6DN90 963 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 ZNF365Q70YC5 407 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 TMEM199Q8N511 208 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 MORC4Q8TE76 937 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 AP5M1Q9H0R1 490 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 TCP11L1Q9NUJ3 509 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 ZMYM6O95789 1325 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 UMODL1Q5DID0 1318 aa13.84□□□□□ -0.19
NDUFS3-204ENST00000525378 PDHBP11177 359 aa13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 PBX2P40425 430 aa13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 ALDH5A1P51649 535 aaPredicted RBP13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 PSMC6P62333 389 aa13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 ITGA7Q13683 1181 aa13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 RASIP1Q5U651 963 aa13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 KIAA1211Q6ZU35 1233 aa13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 RILPL2Q969X0 211 aa13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 VTA1Q9NP79 307 aa13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 Q9Y3F1 56 aa13.83□□□□□ -0.2
NDUFS3-204ENST00000525378 SCN10AQ9Y5Y9 1956 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 PTPDC1A2A3K4 754 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 TRIM6-TRIM34B2RNG4 842 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 B4GALT4O60513 344 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 CABYRO75952 493 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 AKNAD1Q5T1N1 836 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 SLC30A10Q6XR72 485 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 CLEC4DQ8WXI8 215 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms