RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TSPY2A6NKD2 308 aa28.4■■■□□ 2.14
USP47-205ENST00000525257 NMT2O60551 498 aa28.4■■■□□ 2.14
USP47-205ENST00000525257 PTGS1P23219 599 aa28.4■■■□□ 2.14
USP47-205ENST00000525257 PBX2P40425 430 aa28.4■■■□□ 2.14
USP47-205ENST00000525257 NKX3-2P78367 333 aa28.4■■■□□ 2.14
USP47-205ENST00000525257 TLK2Q86UE8 772 aa28.4■■■□□ 2.14
USP47-205ENST00000525257 INCENPQ9NQS7 918 aa28.4■■■□□ 2.14
USP47-205ENST00000525257 MTMR7Q9Y216 660 aa28.4■■■□□ 2.14
USP47-205ENST00000525257 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.4■■■□□ 2.14
USP47-205ENST00000525257 CYP2C18P33260 490 aa28.39■■■□□ 2.14
USP47-205ENST00000525257 MUM1L1Q5H9M0 696 aa28.39■■■□□ 2.14
USP47-205ENST00000525257 PPP4R3BQ5MIZ7 849 aa28.39■■■□□ 2.14
USP47-205ENST00000525257 RASIP1Q5U651 963 aa28.39■■■□□ 2.14
USP47-205ENST00000525257 PSRC1Q6PGN9 363 aaPredicted RBP28.39■■■□□ 2.14
USP47-205ENST00000525257 ZNF365Q70YC5 407 aa28.39■■■□□ 2.14
USP47-205ENST00000525257 USP38Q8NB14 1042 aa28.39■■■□□ 2.14
USP47-205ENST00000525257 PBX4Q9BYU1 374 aa28.39■■■□□ 2.14
USP47-205ENST00000525257 IL17RBQ9NRM6 502 aa28.39■■■□□ 2.14
USP47-205ENST00000525257 PRR12Q9ULL5 1215 aa28.39■■■□□ 2.14
USP47-205ENST00000525257 GNEQ9Y223 722 aaKnown RBP28.39■■■□□ 2.14
USP47-205ENST00000525257 TTC28Q96AY4 2481 aa28.38■■■□□ 2.13
USP47-205ENST00000525257 FOXP2O15409 715 aa28.38■■■□□ 2.13
USP47-205ENST00000525257 PLA2G6O60733 806 aa28.38■■■□□ 2.13
USP47-205ENST00000525257 CD4P01730 458 aa28.38■■■□□ 2.13
USP47-205ENST00000525257 RCSD1Q6JBY9 416 aa28.38■■■□□ 2.13
USP47-205ENST00000525257 AP5M1Q9H0R1 490 aa28.38■■■□□ 2.13
USP47-205ENST00000525257 PCDHB15Q9Y5E8 787 aa28.38■■■□□ 2.13
USP47-205ENST00000525257 CHD9Q3L8U1 2897 aa28.37■■■□□ 2.13
USP47-205ENST00000525257 SMPD1P17405 629 aa28.37■■■□□ 2.13
USP47-205ENST00000525257 MX1P20591 662 aa28.37■■■□□ 2.13
USP47-205ENST00000525257 FSCN1Q16658 493 aaKnown RBP28.37■■■□□ 2.13
USP47-205ENST00000525257 EEPD1Q7L9B9 569 aa28.37■■■□□ 2.13
USP47-205ENST00000525257 FBXO16Q8IX29 292 aaPredicted RBP28.37■■■□□ 2.13
USP47-205ENST00000525257 PDGFCQ9NRA1 345 aa28.37■■■□□ 2.13
USP47-205ENST00000525257 CYP39A1Q9NYL5 469 aa28.37■■■□□ 2.13
USP47-205ENST00000525257 LCTP09848 1927 aa28.37■■■□□ 2.13
USP47-205ENST00000525257 DYNC1LI2O43237 492 aaPredicted RBP28.36■■■□□ 2.13
USP47-205ENST00000525257 SLC43A3Q8NBI5 491 aa28.36■■■□□ 2.13
USP47-205ENST00000525257 IL23AQ9NPF7 189 aa28.36■■■□□ 2.13
USP47-205ENST00000525257 CCPG1Q9ULG6 757 aa28.36■■■□□ 2.13
USP47-205ENST00000525257 RANBP6O60518 1105 aaKnown RBP28.35■■■□□ 2.13
USP47-205ENST00000525257 CABYRO75952 493 aa28.35■■■□□ 2.13
USP47-205ENST00000525257 ITGA7Q13683 1181 aa28.35■■■□□ 2.13
USP47-205ENST00000525257 CCDC96Q2M329 555 aa28.35■■■□□ 2.13
USP47-205ENST00000525257 NSMFQ6X4W1 530 aa28.35■■■□□ 2.13
USP47-205ENST00000525257 PURBQ96QR8 312 aaKnown RBP28.35■■■□□ 2.13
USP47-205ENST00000525257 HIPK3Q9H422 1215 aa28.35■■■□□ 2.13
USP47-205ENST00000525257 UMODL1Q5DID0 1318 aa28.35■■■□□ 2.13
USP47-205ENST00000525257 TMEM63BQ5T3F8 832 aa28.34■■■□□ 2.13
USP47-205ENST00000525257 TAPT1Q6NXT6 567 aa28.34■■■□□ 2.13
USP47-205ENST00000525257 GAS2L1Q99501 681 aaPredicted RBP28.34■■■□□ 2.13
USP47-205ENST00000525257 GRIN2DO15399 1336 aa28.34■■■□□ 2.13
USP47-205ENST00000525257 ZEB2O60315 1214 aa28.33■■■□□ 2.13
USP47-205ENST00000525257 VPS53Q5VIR6 699 aa28.33■■■□□ 2.13
USP47-205ENST00000525257 SYMPKQ92797 1274 aaKnown RBP28.33■■■□□ 2.13
USP47-205ENST00000525257 PRDM12Q9H4Q4 367 aa28.33■■■□□ 2.13
USP47-205ENST00000525257 CXXC1Q9P0U4 656 aaPredicted RBP28.33■■■□□ 2.13
USP47-205ENST00000525257 PSMC6P62333 389 aa28.32■■■□□ 2.12
USP47-205ENST00000525257 IQSEC1Q6DN90 963 aa28.32■■■□□ 2.12
USP47-205ENST00000525257 PPM1EQ8WY54 764 aa28.32■■■□□ 2.12
USP47-205ENST00000525257 HERVK_113Q902F9 699 aa28.32■■■□□ 2.12
USP47-205ENST00000525257 TRPV6Q9H1D0 765 aa28.32■■■□□ 2.12
USP47-205ENST00000525257 GBF1Q92538 1859 aa28.32■■■□□ 2.12
USP47-205ENST00000525257 ICAM1P05362 532 aa28.31■■■□□ 2.12
USP47-205ENST00000525257 SLC16A2P36021 539 aa28.31■■■□□ 2.12
USP47-205ENST00000525257 CCL23P55773 120 aa28.31■■■□□ 2.12
USP47-205ENST00000525257 TTBK2Q6IQ55 1244 aa28.31■■■□□ 2.12
USP47-205ENST00000525257 DCAF4Q8WV16 495 aa28.31■■■□□ 2.12
USP47-205ENST00000525257 VTA1Q9NP79 307 aa28.31■■■□□ 2.12
USP47-205ENST00000525257 PRDM6Q9NQX0 595 aa28.31■■■□□ 2.12
USP47-205ENST00000525257 ANAPC4Q9UJX5 808 aa28.31■■■□□ 2.12
USP47-205ENST00000525257 MYO9BQ13459 2157 aa28.3■■■□□ 2.12
USP47-205ENST00000525257 SALL3Q9BXA9 1300 aa28.3■■■□□ 2.12
USP47-205ENST00000525257 B4GALT4O60513 344 aa28.3■■■□□ 2.12
USP47-205ENST00000525257 FGBP02675 491 aa28.3■■■□□ 2.12
USP47-205ENST00000525257 KIAA1211Q6ZU35 1233 aa28.3■■■□□ 2.12
USP47-205ENST00000525257 NOC4LQ9BVI4 516 aaKnown RBP28.3■■■□□ 2.12
USP47-205ENST00000525257 MTIF3Q9H2K0 278 aaKnown RBP28.3■■■□□ 2.12
USP47-205ENST00000525257 RANBP17Q9H2T7 1088 aaKnown RBP28.3■■■□□ 2.12
USP47-205ENST00000525257 TOMM22Q9NS69 142 aa28.3■■■□□ 2.12
USP47-205ENST00000525257 MSRAQ9UJ68 235 aa28.3■■■□□ 2.12
USP47-205ENST00000525257 ORC4O43929 436 aa28.29■■■□□ 2.12
USP47-205ENST00000525257 RAB30Q15771 203 aa28.29■■■□□ 2.12
USP47-205ENST00000525257 TJAP1Q5JTD0 557 aa28.29■■■□□ 2.12
USP47-205ENST00000525257 OTOP2Q7RTS6 562 aa28.29■■■□□ 2.12
USP47-205ENST00000525257 Q9Y3F1 56 aa28.29■■■□□ 2.12
USP47-205ENST00000525257 NOVP48745 357 aa28.28■■■□□ 2.12
USP47-205ENST00000525257 BAATQ14032 418 aaPredicted RBP28.28■■■□□ 2.12
USP47-205ENST00000525257 MORC4Q8TE76 937 aa28.28■■■□□ 2.12
USP47-205ENST00000525257 WNT8AQ9H1J5 351 aa28.28■■■□□ 2.12
USP47-205ENST00000525257 NKX2-4Q9H2Z4 354 aa28.28■■■□□ 2.12
USP47-205ENST00000525257 FRMPD2Q68DX3 1309 aaPredicted RBP28.27■■■□□ 2.12
USP47-205ENST00000525257 NFIBO00712 420 aa28.27■■■□□ 2.12
USP47-205ENST00000525257 RRP12Q5JTH9 1297 aaKnown RBP28.27■■■□□ 2.12
USP47-205ENST00000525257 SYDE2Q5VT97 1194 aa28.27■■■□□ 2.12
USP47-205ENST00000525257 SEZ6LQ9BYH1 1024 aa28.27■■■□□ 2.12
USP47-205ENST00000525257 GPCPD1Q9NPB8 672 aa28.27■■■□□ 2.12
USP47-205ENST00000525257 ADD3Q9UEY8 706 aaKnown RBP28.27■■■□□ 2.12
USP47-205ENST00000525257 ALDH5A1P51649 535 aaPredicted RBP28.26■■■□□ 2.11
USP47-205ENST00000525257 EVI5LQ96CN4 794 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms