RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 PAPLNO95428 1278 aa6.65□□□□□ -1.34
CD44-215ENST00000525241 AFMP43652 599 aa6.65□□□□□ -1.34
CD44-215ENST00000525241 GFRA1P56159 465 aa6.65□□□□□ -1.34
CD44-215ENST00000525241 TIGD5Q53EQ6 642 aa6.65□□□□□ -1.34
CD44-215ENST00000525241 SLCO6A1Q86UG4 719 aa6.65□□□□□ -1.34
CD44-215ENST00000525241 NAT16Q8N8M0 369 aa6.65□□□□□ -1.34
CD44-215ENST00000525241 MYLIPQ8WY64 445 aa6.65□□□□□ -1.34
CD44-215ENST00000525241 CCDC140Q96MF4 163 aa6.65□□□□□ -1.34
CD44-215ENST00000525241 GPRC5CQ9NQ84 441 aa6.65□□□□□ -1.34
CD44-215ENST00000525241 THBDP07204 575 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 SNRPB2P08579 225 aaKnown RBP6.64□□□□□ -1.35
CD44-215ENST00000525241 RAC2P15153 192 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 RTP1P59025 263 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 HLA-DQA1Q5Y7H0 255 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 CYP2R1Q6VVX0 501 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 CEP128Q6ZU80 1094 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 LILRB2Q8N423 598 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 JMYQ8N9B5 988 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 ZBTB38Q8NAP3 1195 aaPredicted RBP6.64□□□□□ -1.35
CD44-215ENST00000525241 TMEM145Q8NBT3 493 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 KREMEN2Q8NCW0 462 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 NPLOC4Q8TAT6 608 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 FRS2Q8WU20 508 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 C1orf159Q96HA4 380 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 AARSD1Q9BTE6 412 aaKnown RBP6.64□□□□□ -1.35
CD44-215ENST00000525241 KDM2BQ8NHM5 1336 aa6.64□□□□□ -1.35
CD44-215ENST00000525241 A0A1W2PQ45 241 aaPredicted RBP6.63□□□□□ -1.35
CD44-215ENST00000525241 A0A1W2PQY0 241 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 ARNTLO00327 626 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 BIN1O00499 593 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 NRDCO43847 1150 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 DLX3O60479 287 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 PSPNO60542 156 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 TBC1D8O95759 1140 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 CPP00450 1065 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 FAM153BP0C7A2 387 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 FGFR1P11362 822 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 PLS3P13797 630 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 TAL1P17542 331 aaPredicted RBP6.63□□□□□ -1.35
CD44-215ENST00000525241 ECI1P42126 302 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 SLC14A2Q15849 920 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 PRSS53Q2L4Q9 553 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 HSF5Q4G112 596 aaPredicted RBP6.63□□□□□ -1.35
CD44-215ENST00000525241 YOD1Q5VVQ6 348 aaPredicted RBP6.63□□□□□ -1.35
CD44-215ENST00000525241 DENND5AQ6IQ26 1287 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 KSR1Q8IVT5 923 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 LILRA2Q8N149 483 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 OSBP2Q969R2 916 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 SHISA4Q96DD7 197 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 MRFAP1L1Q96HT8 127 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 KIRREL1Q96J84 757 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 JMJD8Q96S16 334 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 IER2Q9BTL4 223 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 CLEC1BQ9P126 229 aa6.63□□□□□ -1.35
CD44-215ENST00000525241 TRAV20A0A0B4J274 112 aa6.62□□□□□ -1.35
CD44-215ENST00000525241 JUNBP17275 347 aaPredicted RBP6.62□□□□□ -1.35
CD44-215ENST00000525241 PAMP19021 973 aa6.62□□□□□ -1.35
CD44-215ENST00000525241 KCNJ6P48051 423 aa6.62□□□□□ -1.35
CD44-215ENST00000525241 MAP4K2Q12851 820 aa6.62□□□□□ -1.35
CD44-215ENST00000525241 SLC35F1Q5T1Q4 408 aa6.62□□□□□ -1.35
CD44-215ENST00000525241 FOXB2Q5VYV0 432 aa6.62□□□□□ -1.35
CD44-215ENST00000525241 ABHD4Q8TB40 342 aa6.62□□□□□ -1.35
CD44-215ENST00000525241 PLCD4Q9BRC7 762 aa6.62□□□□□ -1.35
CD44-215ENST00000525241 CARMIL2Q6F5E8 1435 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 NPHP3-ACAD11A0A0J9YXS1 232 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 WTIPA6NIX2 430 aaPredicted RBP6.61□□□□□ -1.35
CD44-215ENST00000525241 PRODHO43272 600 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 PABPC1P11940 636 aaKnown RBP6.61□□□□□ -1.35
CD44-215ENST00000525241 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 SNX17Q15036 470 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 LONRF2Q1L5Z9 754 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 MBLAC2Q68D91 279 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 GALNT18Q6P9A2 607 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 NSMFQ6X4W1 530 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 NLRX1Q86UT6 975 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 CPNE8Q86YQ8 564 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 CCDC103Q8IW40 242 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 KCTD13Q8WZ19 329 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 ASIC4Q96FT7 647 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 MMP19Q99542 508 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 RNF32Q9H0A6 362 aa6.61□□□□□ -1.35
CD44-215ENST00000525241 TMEFF2Q9UIK5 374 aaPredicted RBP6.61□□□□□ -1.35
CD44-215ENST00000525241 TRBV23OR9-2A0A075B6M9 112 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 GALK1P51570 392 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 LAPTM5Q13571 262 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 TESK1Q15569 626 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 ACBD5Q5T8D3 534 aaPredicted RBP6.6□□□□□ -1.35
CD44-215ENST00000525241 ZSWIM9Q86XI8 627 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 JAMLQ86YT9 394 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 THAP3Q8WTV1 239 aaPredicted RBP6.6□□□□□ -1.35
CD44-215ENST00000525241 CWC22Q9HCG8 908 aaKnown RBP6.6□□□□□ -1.35
CD44-215ENST00000525241 IMPACTQ9P2X3 320 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 GPR160Q9UJ42 338 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 ACSL6Q9UKU0 697 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 TAF6LQ9Y6J9 622 aa6.6□□□□□ -1.35
CD44-215ENST00000525241 C7orf72A4D263 438 aa6.59□□□□□ -1.35
CD44-215ENST00000525241 GLI1P08151 1106 aa6.59□□□□□ -1.35
CD44-215ENST00000525241 L1CAMP32004 1257 aa6.59□□□□□ -1.35
CD44-215ENST00000525241 MVKQ03426 396 aa6.59□□□□□ -1.35
CD44-215ENST00000525241 KCNMB1Q16558 191 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms