RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 SNX12Q9UMY4 172 aa14.65□□□□□ -0.06
TRIM3-203ENST00000525074 ALS2Q96Q42 1657 aa14.65□□□□□ -0.06
TRIM3-203ENST00000525074 ATP2C1P98194 919 aaPredicted RBP14.64□□□□□ -0.07
TRIM3-203ENST00000525074 ACTN3Q08043 901 aaPredicted RBP14.64□□□□□ -0.07
TRIM3-203ENST00000525074 ENOX2Q16206 610 aaKnown RBP14.64□□□□□ -0.07
TRIM3-203ENST00000525074 IFIT1BQ5T764 474 aaKnown RBP14.64□□□□□ -0.07
TRIM3-203ENST00000525074 LPIN2Q92539 896 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 RBM12Q9NTZ6 932 aaKnown RBP14.64□□□□□ -0.07
TRIM3-203ENST00000525074 COL18A1P39060 1754 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 COL5A2P05997 1499 aaPredicted RBP14.64□□□□□ -0.07
TRIM3-203ENST00000525074 H7C1D1 291 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 EPHB6O15197 1021 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 KLRK1P26718 216 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 CARSP49589 748 aaKnown RBP14.64□□□□□ -0.07
TRIM3-203ENST00000525074 NPY5RQ15761 445 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 EHBP1Q8NDI1 1231 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 ZNF507Q8TCN5 953 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 STAG1Q8WVM7 1258 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 CEP89Q96ST8 783 aa14.64□□□□□ -0.07
TRIM3-203ENST00000525074 NUTM2BA6NNL0 878 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-203ENST00000525074 NUTM2EB1AL46 878 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-203ENST00000525074 CCDC178Q5BJE1 867 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 C8orf74Q6P047 294 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 ADSSL1Q8N142 457 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 GPKOWQ92917 476 aaPredicted RBP eCLIP14.63□□□□□ -0.07
TRIM3-203ENST00000525074 OSBPL9Q96SU4 736 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 ABCC12Q96J65 1359 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 OPA1O60313 960 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 IFT88Q13099 833 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 NKX1-1Q15270 411 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-203ENST00000525074 AMOTL1Q8IY63 956 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 RPGRIP1Q96KN7 1286 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 SH3GL2Q99962 352 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 EXOC1Q9NV70 894 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 SALL4Q9UJQ4 1053 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 NIP7Q9Y221 180 aaKnown RBP eCLIP14.63□□□□□ -0.07
TRIM3-203ENST00000525074 GOLGA8KD6RF30 607 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 AKR1B10O60218 316 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 SLC5A1P13866 664 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 SWT1Q5T5J6 900 aaKnown RBP14.63□□□□□ -0.07
TRIM3-203ENST00000525074 HAUS3Q68CZ6 603 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 CATIPQ7Z7H3 387 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 PPANQ9NQ55 473 aaKnown RBP14.63□□□□□ -0.07
TRIM3-203ENST00000525074 PACSIN2Q9UNF0 486 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-203ENST00000525074 MYH10P35580 1976 aa14.63□□□□□ -0.07
TRIM3-203ENST00000525074 GLI1P08151 1106 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 GUCY2DQ02846 1103 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 ALX1Q15699 326 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 IQCEQ6IPM2 695 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 NOC4LQ9BVI4 516 aaKnown RBP14.62□□□□□ -0.07
TRIM3-203ENST00000525074 STIM2Q9P246 746 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 TACC1O75410 805 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 VAV2P52735 878 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 HDLBPQ00341 1268 aaKnown RBP14.62□□□□□ -0.07
TRIM3-203ENST00000525074 TRIM28Q13263 835 aaKnown RBP14.62□□□□□ -0.07
TRIM3-203ENST00000525074 PDS5AQ29RF7 1337 aaKnown RBP14.62□□□□□ -0.07
TRIM3-203ENST00000525074 ESR2Q92731 530 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 CNOT6LQ96LI5 555 aaKnown RBP14.62□□□□□ -0.07
TRIM3-203ENST00000525074 MMRN2Q9H8L6 949 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 EPB41L5Q9HCM4 733 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 RMND1Q9NWS8 449 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 TFCP2L1Q9NZI6 479 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 MYH13Q9UKX3 1938 aa14.62□□□□□ -0.07
TRIM3-203ENST00000525074 SPEF2Q9C093 1822 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 DDX60Q8IY21 1712 aaKnown RBP14.61□□□□□ -0.07
TRIM3-203ENST00000525074 FAM170AA1A519 330 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 PSMA7O14818 248 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 CYP2D6P10635 497 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 FCER1AP12319 257 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 LSP1P33241 339 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 ATP6V1AP38606 617 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 EIF4A3P38919 411 aaKnown RBP14.61□□□□□ -0.07
TRIM3-203ENST00000525074 DNM2P50570 870 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 CHRNDQ07001 517 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 FUT2Q10981 343 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 SEC23AQ15436 765 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 SRBD1Q8N5C6 995 aaKnown RBP14.61□□□□□ -0.07
TRIM3-203ENST00000525074 CABS1Q96KC9 395 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 SETQ01105 290 aaPredicted RBP14.61□□□□□ -0.07
TRIM3-203ENST00000525074 RASSF7Q02833 373 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 CFAP58Q5T655 872 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 NAA35Q5VZE5 725 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 ANKRD40Q6AI12 368 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 GBP6Q6ZN66 633 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 TMTC2Q8N394 836 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 ZSCAN10Q96SZ4 725 aaPredicted RBP14.61□□□□□ -0.07
TRIM3-203ENST00000525074 ARHGAP20Q9P2F6 1191 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 PCDHA13Q9Y5I0 950 aa14.61□□□□□ -0.07
TRIM3-203ENST00000525074 ZNF233A6NK53 670 aa14.6□□□□□ -0.07
TRIM3-203ENST00000525074 MEFVO15553 781 aaPredicted RBP14.6□□□□□ -0.07
TRIM3-203ENST00000525074 SRGNP10124 158 aa14.6□□□□□ -0.07
TRIM3-203ENST00000525074 EPHB4P54760 987 aa14.6□□□□□ -0.07
TRIM3-203ENST00000525074 NAALADL2Q58DX5 795 aa14.6□□□□□ -0.07
TRIM3-203ENST00000525074 MAATS1Q7Z4T9 603 aa14.6□□□□□ -0.07
TRIM3-203ENST00000525074 CEP57Q86XR8 500 aa14.6□□□□□ -0.07
TRIM3-203ENST00000525074 CCDC155Q8N6L0 562 aa14.6□□□□□ -0.07
TRIM3-203ENST00000525074 OR2W6PQ8NHA6 318 aa14.6□□□□□ -0.07
TRIM3-203ENST00000525074 LRRC15Q8TF66 581 aa14.6□□□□□ -0.07
TRIM3-203ENST00000525074 AKAP11Q9UKA4 1901 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms