RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 CCDC87Q9NVE4 849 aa20.34■□□□□ 0.85
PCDHB18P-201ENST00000524813 SBF2Q86WG5 1849 aa20.33■□□□□ 0.85
PCDHB18P-201ENST00000524813 MAGEB6P1A0A0J9YX57 407 aa20.33■□□□□ 0.85
PCDHB18P-201ENST00000524813 EZH2Q15910 746 aaKnown RBP20.33■□□□□ 0.85
PCDHB18P-201ENST00000524813 IQCA1Q86XH1 822 aa20.33■□□□□ 0.85
PCDHB18P-201ENST00000524813 DZIP3Q86Y13 1208 aaKnown RBP20.33■□□□□ 0.85
PCDHB18P-201ENST00000524813 HDAC7Q8WUI4 952 aa20.33■□□□□ 0.85
PCDHB18P-201ENST00000524813 TUBGCP2Q9BSJ2 902 aa20.33■□□□□ 0.85
PCDHB18P-201ENST00000524813 YY1AP1Q9H869 796 aa20.33■□□□□ 0.85
PCDHB18P-201ENST00000524813 DISC1Q9NRI5 854 aa20.33■□□□□ 0.85
PCDHB18P-201ENST00000524813 CICQ96RK0 1608 aaPredicted RBP20.33■□□□□ 0.84
PCDHB18P-201ENST00000524813 EBAG9O00559 213 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 IL6STP40189 918 aaPredicted RBP20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 KIF5AQ12840 1032 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 ARL6IP4Q66PJ3 421 aaKnown RBP20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 INTS5Q6P9B9 1019 aaKnown RBP20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 CREG2Q8IUH2 290 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 MMGT1Q8N4V1 131 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 C4orf32Q8N8J7 132 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 NUP58Q9BVL2 599 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 RABEP2Q9H5N1 569 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 LRP5O75197 1615 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 PSMA7O14818 248 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 DDAH1O94760 285 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 SCG2P13521 617 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 VEGFAP15692 232 aaPredicted RBP20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 ZBED6P86452 979 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 NAALADL2Q58DX5 795 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 PCMTD1Q96MG8 357 aaPredicted RBP20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 LRRC1Q9BTT6 524 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 SNX12Q9UMY4 172 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 FAM169AQ9Y6X4 670 aa20.32■□□□□ 0.84
PCDHB18P-201ENST00000524813 LIG3P49916 1009 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 VAV2P52735 878 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 TBC1D8BQ0IIM8 1120 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 KCNB1Q14721 858 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 TTI2Q6NXR4 508 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 RASSF8Q8NHQ8 419 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 BCAS4Q8TDM0 211 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 SMCR8Q8TEV9 937 aaPredicted RBP20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 EEF2KMTQ96G04 330 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 DEF6Q9H4E7 631 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 LRWD1Q9UFC0 647 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 RREB1Q92766 1687 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 EP400Q96L91 3159 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 KLRC4O43908 158 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 ERLIN2O94905 339 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 GNGT1P63211 74 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 MMS22LQ6ZRQ5 1243 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 ABCF2Q9UG63 623 aa20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 DMGDHQ9UI17 866 aaKnown RBP20.31■□□□□ 0.84
PCDHB18P-201ENST00000524813 GOLGA8KD6RF30 607 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 EIF3HO15372 352 aaKnown RBP eCLIP20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 MRPS25P82663 173 aaKnown RBP20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 SUGP1Q8IWZ8 645 aaKnown RBP20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 CSGALNACT2Q8N6G5 542 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 RETREG2Q8NC44 543 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 PLIN2Q99541 437 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 DUSP9Q99956 384 aaKnown RBP20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 TSGA10Q9BZW7 698 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 GRIN2DO15399 1336 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 DUOX1Q9NRD9 1551 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 PP2D1A8MPX8 630 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 ZNF263O14978 683 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 CCDC96Q2M329 555 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 GBP6Q6ZN66 633 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 GIMAP8Q8ND71 665 aaPredicted RBP20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 NOC3LQ8WTT2 800 aaKnown RBP20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 SH3GL2Q99962 352 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 BRWD3Q6RI45 1802 aa20.3■□□□□ 0.84
PCDHB18P-201ENST00000524813 TTC19Q6DKK2 380 aaPredicted RBP20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 KRT26Q7Z3Y9 468 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 ANKRD18AQ8IVF6 992 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 SHTN1A0MZ66 631 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 RHOBTB3O94955 611 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 MATR3P43243 847 aaKnown RBP eCLIP20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 SLC7A5Q01650 507 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 SPA17Q15506 151 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 PFKFB3Q16875 520 aaPredicted RBP20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 LINC00116Q8NCU8 138 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 TRIM58Q8NG06 486 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 KAT2BQ92831 832 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 CCDC42Q96M95 316 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 CAPN6Q9Y6Q1 641 aa20.29■□□□□ 0.84
PCDHB18P-201ENST00000524813 OPA1O60313 960 aa20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 NMT2O60551 498 aa20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 DYNLL1P63167 89 aaKnown RBP20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 SPATA4Q8NEY3 305 aa20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 RIOK1Q9BRS2 568 aaKnown RBP20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 TACC1O75410 805 aa20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 PLEKP08567 350 aaPredicted RBP20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 DTHD1Q6ZMT9 781 aa20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 ZNF572Q7Z3I7 529 aaPredicted RBP20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 DHTKD1Q96HY7 919 aaPredicted RBP20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 CNOT6LQ96LI5 555 aaKnown RBP20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 MLXIPQ9HAP2 919 aa20.28■□□□□ 0.84
PCDHB18P-201ENST00000524813 USO1O60763 962 aaKnown RBP20.27■□□□□ 0.84
PCDHB18P-201ENST00000524813 MTIF2P46199 727 aaKnown RBP20.27■□□□□ 0.84
PCDHB18P-201ENST00000524813 CDK17Q00537 523 aa20.27■□□□□ 0.84
PCDHB18P-201ENST00000524813 ITIH3Q06033 890 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms