RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MAGI1Q96QZ7 1491 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-208ENST00000524652 KIF27Q86VH2 1401 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 B8ZZF3 427 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 PRRG2O14669 202 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 BMP7P18075 431 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 HOXA5P20719 270 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 CD247P20963 164 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 NOP2P46087 812 aaKnown RBP4.83□□□□□ -1.64
CSDE1-208ENST00000524652 CDR1P51861 262 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 CBX2Q14781 532 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-208ENST00000524652 NR1I3Q14994 352 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 NOL9Q5SY16 702 aaKnown RBP4.83□□□□□ -1.64
CSDE1-208ENST00000524652 AXDND1Q5T1B0 1012 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-208ENST00000524652 TDRD10Q5VZ19 366 aaKnown RBP4.83□□□□□ -1.64
CSDE1-208ENST00000524652 HLA-DQA1Q5Y7H0 255 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 DCAF15Q66K64 600 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 TMC6Q7Z403 805 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 LSRQ86X29 649 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-208ENST00000524652 MARCH10Q8NA82 808 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-208ENST00000524652 TMEM52Q8NDY8 209 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 MZB1Q8WU39 189 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 DACT3Q96B18 629 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-208ENST00000524652 SPATA32Q96LK8 384 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 JMJD8Q96S16 334 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 GP6Q9HCN6 339 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 IMPACTQ9P2X3 320 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 PPT2Q9UMR5 302 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 ADAMTS20P59510 1910 aa4.83□□□□□ -1.64
CSDE1-208ENST00000524652 SYNJ2O15056 1496 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 ZBTB7CA1YPR0 619 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 NUDT19A8MXV4 375 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 H0Y8X5 98 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 FGF10O15520 208 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-208ENST00000524652 SRGAP3O43295 1099 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 GSTM1P09488 218 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 ITGA4P13612 1032 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 VAMP1P23763 118 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 AFF3P51826 1226 aaKnown RBP4.82□□□□□ -1.64
CSDE1-208ENST00000524652 CORO7P57737 925 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 ZNF445P59923 1031 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 RACK1P63244 317 aaKnown RBP4.82□□□□□ -1.64
CSDE1-208ENST00000524652 RAB3GAP1Q15042 981 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 ZYXQ15942 572 aaKnown RBP4.82□□□□□ -1.64
CSDE1-208ENST00000524652 FBXW10Q5XX13 1052 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 RPTNQ6XPR3 784 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 UNC5AQ6ZN44 842 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 C20orf173Q96LM9 149 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 ZCCHC4Q9H5U6 513 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 EPB41L4AQ9HCS5 686 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-208ENST00000524652 DDX41Q9UJV9 622 aaKnown RBP4.82□□□□□ -1.64
CSDE1-208ENST00000524652 ZNF214Q9UL59 606 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-208ENST00000524652 SF3B6Q9Y3B4 125 aaKnown RBP4.82□□□□□ -1.64
CSDE1-208ENST00000524652 SLC12A7Q9Y666 1083 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 CLASP1Q7Z460 1538 aa4.82□□□□□ -1.64
CSDE1-208ENST00000524652 GRIN2AQ12879 1464 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 PRXQ9BXM0 1461 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 A0A087WZG4 1122 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 A0A1W2PQ27 194 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 A0A1W2PQ64 194 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 A0A1W2PQC6 194 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 A0A1W2PQD8 194 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 SCAMP3O14828 347 aaKnown RBP4.81□□□□□ -1.64
CSDE1-208ENST00000524652 TRIM13O60858 407 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 MAPKAPK2P49137 400 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 PLEKHN1Q494U1 663 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-208ENST00000524652 CNKSR3Q6P9H4 555 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 ZC3H14Q6PJT7 736 aaKnown RBP4.81□□□□□ -1.64
CSDE1-208ENST00000524652 LDHDQ86WU2 507 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 FAM129CQ86XR2 697 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 JAMLQ86YT9 394 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 IGDCC3Q8IVU1 814 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 TMEFF1Q8IYR6 380 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 FIBCD1Q8N539 461 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 PANK1Q8TE04 598 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 PCDHA5Q9Y5H7 936 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 RIMBP3CA6NJZ7 1639 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 RIMBP3BA6NNM3 1639 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 KIF21BO75037 1637 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 RIMBP3Q9UFD9 1639 aa4.81□□□□□ -1.64
CSDE1-208ENST00000524652 FHAD1B1AJZ9 1412 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 A0A0G2JLL6 359 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-208ENST00000524652 CBFA2T2O43439 604 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 SASH1O94885 1247 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 RECKO95980 971 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 POU4F1Q01851 419 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 MVKQ03426 396 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 RUFY4Q6ZNE9 571 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 ZNF654Q8IZM8 581 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 BRF1Q92994 677 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 FCRL3Q96P31 734 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-208ENST00000524652 RTEL1Q9NZ71 1219 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 ZNF451Q9Y4E5 1061 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 RAPGEF2Q9Y4G8 1499 aa4.8□□□□□ -1.64
CSDE1-208ENST00000524652 SHROOM2Q13796 1616 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 IRS2Q9Y4H2 1338 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 TBC1D8O95759 1140 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 TP53P04637 393 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-208ENST00000524652 CYBBP04839 570 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 DBHP09172 617 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 SOX9P48436 509 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms