RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 TYW1BQ6NUM6 668 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 TMED8Q6PL24 325 aaPredicted RBP12.84□□□□□ -0.35
PTPRK-217ENST00000524534 AMOTL1Q8IY63 956 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 DAGLBQ8NCG7 672 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 RASSF8Q8NHQ8 419 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
PTPRK-217ENST00000524534 NSUN4Q96CB9 384 aaKnown RBP12.84□□□□□ -0.35
PTPRK-217ENST00000524534 CUEDC2Q9H467 287 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 JADE2Q9NQC1 790 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 SNX12Q9UMY4 172 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 PCDHA6Q9UN73 950 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 JRKLQ9Y4A0 524 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 PCDHA8Q9Y5H6 950 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 A0A1B0GUL6 1792 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 PHLPP1O60346 1717 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 BAZ2BQ9UIF8 2168 aaKnown RBP12.84□□□□□ -0.35
PTPRK-217ENST00000524534 CCDC194A0A1B0GVG4 234 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 MACROD2A1Z1Q3 448 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 LAD1O00515 517 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 PRLRP16471 622 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 HNRNPH3P31942 346 aaKnown RBP12.84□□□□□ -0.35
PTPRK-217ENST00000524534 PRPHP41219 470 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 DNAJC21Q5F1R6 531 aaKnown RBP12.84□□□□□ -0.35
PTPRK-217ENST00000524534 ANKRD40Q6AI12 368 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 FAM114A1Q8IWE2 563 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 TRIM58Q8NG06 486 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 FAM76AQ8TAV0 307 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 FAM84BQ96KN1 310 aaPredicted RBP12.84□□□□□ -0.35
PTPRK-217ENST00000524534 PLEKHA4Q9H4M7 779 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 LAMB2P55268 1798 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 FLT1P17948 1338 aa12.84□□□□□ -0.35
PTPRK-217ENST00000524534 GOLGA6BA6NDN3 693 aa12.83□□□□□ -0.35
PTPRK-217ENST00000524534 CAVIN4Q5BKX8 364 aa12.83□□□□□ -0.35
PTPRK-217ENST00000524534 CCDC70Q6NSX1 233 aa12.83□□□□□ -0.35
PTPRK-217ENST00000524534 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.83□□□□□ -0.35
PTPRK-217ENST00000524534 PACS2Q86VP3 889 aa12.83□□□□□ -0.35
PTPRK-217ENST00000524534 IPO4Q8TEX9 1081 aaKnown RBP12.83□□□□□ -0.35
PTPRK-217ENST00000524534 PPM1EQ8WY54 764 aa12.83□□□□□ -0.35
PTPRK-217ENST00000524534 IQCDQ96DY2 449 aa12.83□□□□□ -0.35
PTPRK-217ENST00000524534 PLIN2Q99541 437 aa12.83□□□□□ -0.35
PTPRK-217ENST00000524534 CRNKL1Q9BZJ0 848 aaKnown RBP12.83□□□□□ -0.35
PTPRK-217ENST00000524534 LRWD1Q9UFC0 647 aa12.83□□□□□ -0.35
PTPRK-217ENST00000524534 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.36
PTPRK-217ENST00000524534 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
PTPRK-217ENST00000524534 CYP2D6P10635 497 aa12.83□□□□□ -0.36
PTPRK-217ENST00000524534 TTC31Q49AM3 519 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-217ENST00000524534 C7orf25Q9BPX7 421 aa12.83□□□□□ -0.36
PTPRK-217ENST00000524534 NOC4LQ9BVI4 516 aaKnown RBP12.83□□□□□ -0.36
PTPRK-217ENST00000524534 TRIM9Q9C026 710 aa12.83□□□□□ -0.36
PTPRK-217ENST00000524534 ARPP21Q9UBL0 812 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-217ENST00000524534 NIP7Q9Y221 180 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTPRK-217ENST00000524534 GOLGA6CA6NDK9 693 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 CPP00450 1065 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 GOLGA6DP0CG33 693 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 PPP1R2P41236 205 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
PTPRK-217ENST00000524534 MECOMQ03112 1051 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 PDE4DQ08499 809 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 STK4Q13043 487 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 SPA17Q15506 151 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 INF2Q27J81 1249 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 COBLL1Q53SF7 1204 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 GALNT17Q6IS24 598 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 KRT26Q7Z3Y9 468 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 EFCAB13Q8IY85 973 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 STAG2Q8N3U4 1231 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 ANKS1AQ92625 1134 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 CCDC42Q96M95 316 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 SH3GL2Q99962 352 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 SH2D4AQ9H788 454 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 KAT14Q9H8E8 782 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 BSDC1Q9NW68 430 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-217ENST00000524534 GOLGA6AQ9NYA3 693 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 PLAGL2Q9UPG8 496 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 SCN7AQ01118 1682 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 USO1O60763 962 aaKnown RBP12.82□□□□□ -0.36
PTPRK-217ENST00000524534 TACC1O75410 805 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 LCA5LO95447 670 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 ADAMTS2O95450 1211 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 PLCG1P19174 1290 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
PTPRK-217ENST00000524534 IRAK1P51617 712 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 PPFIA1Q13136 1202 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
PTPRK-217ENST00000524534 FBXO33Q7Z6M2 555 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 ANKRD18AQ8IVF6 992 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 SMCR8Q8TEV9 937 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-217ENST00000524534 CCDC47Q96A33 483 aaKnown RBP12.82□□□□□ -0.36
PTPRK-217ENST00000524534 EEF2KMTQ96G04 330 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 AK8Q96MA6 479 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 PCMTD1Q96MG8 357 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-217ENST00000524534 PCDHA13Q9Y5I0 950 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 CAPN6Q9Y6Q1 641 aa12.82□□□□□ -0.36
PTPRK-217ENST00000524534 LAMB1P07942 1786 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 ANKRD65E5RJM6 399 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms