RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	USP51	Q70EK9	711 aa		6.65	□□□□□ -1.34
PCM1-223	ENST00000524356	LIMS2	Q7Z4I7	341 aa		6.65	□□□□□ -1.34
PCM1-223	ENST00000524356	ADAMTS17	Q8TE56	1095 aa		6.65	□□□□□ -1.34
PCM1-223	ENST00000524356	KISS1R	Q969F8	398 aa	Predicted RBP	6.65	□□□□□ -1.34
PCM1-223	ENST00000524356	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.65	□□□□□ -1.34
PCM1-223	ENST00000524356		E9PSI1	815 aa		6.64	□□□□□ -1.35
PCM1-223	ENST00000524356	P4HB	P07237	508 aa	Known RBP	6.64	□□□□□ -1.35
PCM1-223	ENST00000524356	VAV1	P15498	845 aa		6.64	□□□□□ -1.35
PCM1-223	ENST00000524356	ARSH	Q5FYA8	562 aa		6.64	□□□□□ -1.35
PCM1-223	ENST00000524356	BICRAL	Q6AI39	1079 aa		6.64	□□□□□ -1.35
PCM1-223	ENST00000524356	CRTC3	Q6UUV7	619 aa		6.64	□□□□□ -1.35
PCM1-223	ENST00000524356	INVS	Q9Y283	1065 aa		6.64	□□□□□ -1.35
PCM1-223	ENST00000524356		F8W031	263 aa	Predicted RBP	6.63	□□□□□ -1.35
PCM1-223	ENST00000524356	RLBP1	P12271	317 aa		6.63	□□□□□ -1.35
PCM1-223	ENST00000524356	HSP90B1	P14625	803 aa	Known RBP	6.63	□□□□□ -1.35
PCM1-223	ENST00000524356	CDK11B	P21127	795 aa	Known RBP	6.63	□□□□□ -1.35
PCM1-223	ENST00000524356	POLR2B	P30876	1174 aa	Known RBP	6.63	□□□□□ -1.35
PCM1-223	ENST00000524356	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.63	□□□□□ -1.35
PCM1-223	ENST00000524356	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.63	□□□□□ -1.35
PCM1-223	ENST00000524356	ASB16	Q96NS5	453 aa		6.63	□□□□□ -1.35
PCM1-223	ENST00000524356	BCAS3	Q9H6U6	928 aa		6.63	□□□□□ -1.35
PCM1-223	ENST00000524356	CDK11A	Q9UQ88	783 aa	Predicted RBP	6.63	□□□□□ -1.35
PCM1-223	ENST00000524356		A0A1W2PQ27	194 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356		A0A1W2PQ64	194 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356		A0A1W2PQC6	194 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356		A0A1W2PQD8	194 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356		F6X3S4	739 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	AMH	P03971	560 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	LDHB	P07195	334 aa	Known RBP	6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	PML	P29590	882 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	CAMK2G	Q13555	558 aa	Predicted RBP	6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	DIEXF	Q68CQ4	756 aa	Known RBP	6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	SMARCC2	Q8TAQ2	1214 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	RNF19A	Q9NV58	838 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	GFOD1	Q9NXC2	390 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	HS3ST3A1	Q9Y663	406 aa		6.62	□□□□□ -1.35
PCM1-223	ENST00000524356	ATAD2B	Q9ULI0	1458 aa		6.61	□□□□□ -1.35
PCM1-223	ENST00000524356	RAG1	P15918	1043 aa		6.61	□□□□□ -1.35
PCM1-223	ENST00000524356	LMNB2	Q03252	620 aa		6.61	□□□□□ -1.35
PCM1-223	ENST00000524356	ALG3	Q92685	438 aa		6.61	□□□□□ -1.35
PCM1-223	ENST00000524356	PUS7	Q96PZ0	661 aa	Known RBP	6.61	□□□□□ -1.35
PCM1-223	ENST00000524356	PDLIM7	Q9NR12	457 aa		6.61	□□□□□ -1.35
PCM1-223	ENST00000524356	AK5	Q9Y6K8	562 aa		6.61	□□□□□ -1.35
PCM1-223	ENST00000524356	PF4	P02776	101 aa		6.6	□□□□□ -1.35
PCM1-223	ENST00000524356	HMGB1	P09429	215 aa	Known RBP	6.6	□□□□□ -1.35
PCM1-223	ENST00000524356	TACR1	P25103	407 aa		6.6	□□□□□ -1.35
PCM1-223	ENST00000524356	ICAM4	Q14773	271 aa		6.6	□□□□□ -1.35
PCM1-223	ENST00000524356	RGL3	Q3MIN7	710 aa		6.6	□□□□□ -1.35
PCM1-223	ENST00000524356	NOC4L	Q9BVI4	516 aa	Known RBP	6.6	□□□□□ -1.35
PCM1-223	ENST00000524356	LTBP3	Q9NS15	1303 aa		6.59	□□□□□ -1.35
PCM1-223	ENST00000524356	GLB1L	Q6UWU2	654 aa		6.59	□□□□□ -1.35
PCM1-223	ENST00000524356	LGI4	Q8N135	537 aa		6.59	□□□□□ -1.35
PCM1-223	ENST00000524356	ZBTB8A	Q96BR9	441 aa		6.59	□□□□□ -1.35
PCM1-223	ENST00000524356	KLC2	Q9H0B6	622 aa		6.59	□□□□□ -1.35
PCM1-223	ENST00000524356	ANTXR1	Q9H6X2	564 aa		6.59	□□□□□ -1.35
PCM1-223	ENST00000524356	WDR26	Q9H7D7	661 aa		6.59	□□□□□ -1.35
PCM1-223	ENST00000524356	GNE	Q9Y223	722 aa	Known RBP	6.59	□□□□□ -1.35
PCM1-223	ENST00000524356	ZNF536	O15090	1300 aa		6.58	□□□□□ -1.36
PCM1-223	ENST00000524356		A0A1W2PQJ5	194 aa		6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	EIF5B	O60841	1220 aa	Known RBP	6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	SMAD4	Q13485	552 aa	Known RBP	6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	HLA-DQA1	Q5Y7H0	255 aa		6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	TTLL7	Q6ZT98	887 aa		6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	JAML	Q86YT9	394 aa		6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	NAT16	Q8N8M0	369 aa		6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	RHOV	Q96L33	236 aa		6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	RXFP1	Q9HBX9	757 aa		6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	CD248	Q9HCU0	757 aa		6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	DBR1	Q9UK59	544 aa	Known RBP	6.58	□□□□□ -1.36
PCM1-223	ENST00000524356	RAD51AP2	Q09MP3	1159 aa		6.57	□□□□□ -1.36
PCM1-223	ENST00000524356	REC114	Q7Z4M0	266 aa		6.57	□□□□□ -1.36
PCM1-223	ENST00000524356	FBXO27	Q8NI29	283 aa		6.57	□□□□□ -1.36
PCM1-223	ENST00000524356	SLC12A9	Q9BXP2	914 aa		6.57	□□□□□ -1.36
PCM1-223	ENST00000524356	CLEC3A	O75596	197 aa		6.56	□□□□□ -1.36
PCM1-223	ENST00000524356	GSTM1	P09488	218 aa		6.56	□□□□□ -1.36
PCM1-223	ENST00000524356	GLI4	P10075	376 aa		6.56	□□□□□ -1.36
PCM1-223	ENST00000524356	LINC00482	Q8N8I6	264 aa		6.56	□□□□□ -1.36
PCM1-223	ENST00000524356	CPA5	Q8WXQ8	436 aa		6.56	□□□□□ -1.36
PCM1-223	ENST00000524356	TSPAN17	Q96FV3	270 aa		6.56	□□□□□ -1.36
PCM1-223	ENST00000524356	USP35	Q9P2H5	1018 aa		6.56	□□□□□ -1.36
PCM1-223	ENST00000524356	THOC2	Q8NI27	1593 aa	Known RBP	6.56	□□□□□ -1.36
PCM1-223	ENST00000524356	PATL2	C9JE40	543 aa	Known RBP	6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	KCNA1	Q09470	495 aa		6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	KIAA2012	Q0VF49	1180 aa		6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	OVOS1	Q6IE37	1185 aa		6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	PALM2	Q8IXS6	379 aa		6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	CDK5RAP1	Q96SZ6	601 aa	Known RBP	6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	GMIP	Q9P107	970 aa		6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	PPP4R1L	Q9P1A2	415 aa		6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	C11orf21	Q9P2W6	132 aa		6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	PCDHB12	Q9Y5F1	795 aa		6.55	□□□□□ -1.36
PCM1-223	ENST00000524356	MROH6	A6NGR9	719 aa		6.54	□□□□□ -1.36
PCM1-223	ENST00000524356	ST13	P50502	369 aa	Known RBP	6.54	□□□□□ -1.36
PCM1-223	ENST00000524356	CACNB2	Q08289	660 aa	Predicted RBP	6.54	□□□□□ -1.36
PCM1-223	ENST00000524356	MPP2	Q14168	576 aa		6.54	□□□□□ -1.36
PCM1-223	ENST00000524356	ZNF575	Q86XF7	245 aa		6.54	□□□□□ -1.36
PCM1-223	ENST00000524356	DDX11	Q96FC9	970 aa		6.54	□□□□□ -1.36
PCM1-223	ENST00000524356	SMARCA2	P51531	1590 aa		6.53	□□□□□ -1.36
PCM1-223	ENST00000524356	FGF10	O15520	208 aa	Predicted RBP	6.53	□□□□□ -1.36
PCM1-223	ENST00000524356	PRPF40A	O75400	957 aa	Known RBP	6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms