RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 SIAH1Q8IUQ4 282 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 SAMD3Q8N6K7 520 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 SYMPKQ92797 1274 aaKnown RBP11.3□□□□□ -0.6
VPS13B-212ENST00000524330 DCPSQ96C86 337 aaKnown RBP11.3□□□□□ -0.6
VPS13B-212ENST00000524330 CALML4Q96GE6 196 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 LRRC27Q9C0I9 530 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
VPS13B-212ENST00000524330 RMND1Q9NWS8 449 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 RNF181Q9P0P0 153 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 RABGAP1Q9Y3P9 1069 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 ABCB11O95342 1321 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 ZNF541Q9H0D2 1346 aa11.3□□□□□ -0.6
VPS13B-212ENST00000524330 VEGFAP15692 232 aaPredicted RBP11.29□□□□□ -0.6
VPS13B-212ENST00000524330 HOXA7P31268 230 aaPredicted RBP11.29□□□□□ -0.6
VPS13B-212ENST00000524330 NF2P35240 595 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 AMPD3Q01432 767 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 DHX8Q14562 1220 aaKnown RBP11.29□□□□□ -0.6
VPS13B-212ENST00000524330 CALCRLQ16602 461 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 ANGEL2Q5VTE6 544 aaKnown RBP11.29□□□□□ -0.6
VPS13B-212ENST00000524330 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 SCYL3Q8IZE3 742 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 DHX58Q96C10 678 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 SYT17Q9BSW7 474 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 PANK2Q9BZ23 570 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 CCSER1Q9C0I3 900 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 DNAJC25Q9H1X3 360 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 CBX8Q9HC52 389 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 SERTAD1Q9UHV2 236 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 TUBE1Q9UJT0 475 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 PRR12Q9ULL5 1215 aa11.29□□□□□ -0.6
VPS13B-212ENST00000524330 ZC3H4Q9UPT8 1303 aaKnown RBP11.29□□□□□ -0.6
VPS13B-212ENST00000524330 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 C19orf81C9J6K1 198 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 STAT6P42226 847 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 LONRF3Q496Y0 759 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 FAM83BQ5T0W9 1011 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 RRAGBQ5VZM2 374 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 RASGRP2Q7LDG7 609 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 MCF2L2Q86YR7 1114 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 PDILTQ8N807 584 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 PRPF38AQ8NAV1 312 aaKnown RBP11.28□□□□□ -0.6
VPS13B-212ENST00000524330 MLKLQ8NB16 471 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 ACER1Q8TDN7 264 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 TEPSINQ96N21 525 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 WDR18Q9BV38 432 aa11.28□□□□□ -0.6
VPS13B-212ENST00000524330 PHF20L1A8MW92 1017 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 GCOM1H8Y6P7 765 aaPredicted RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 PPP1R12BO60237 982 aaPredicted RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 GRIN3BO60391 1043 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 ZBED4O75132 1171 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 POLR2MP0CAP2 368 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 ZNF76P36508 570 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 ECE1P42892 770 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 CLK2P49760 499 aaKnown RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 PDIA5Q14554 519 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 RRP1BQ14684 758 aaKnown RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 CABP7Q86V35 215 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 SLFN12Q8IYM2 578 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 SPICE1Q8N0Z3 855 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 C4orf32Q8N8J7 132 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 KIFC2Q96AC6 838 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 PDLIM2Q96JY6 352 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 GSDMAQ96QA5 445 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 NUP88Q99567 741 aaPredicted RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 SLF1Q9BQI6 1058 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 ANO3Q9BYT9 981 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 MAP3K20Q9NYL2 800 aaKnown RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 GGA3Q9NZ52 723 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 DDX25Q9UHL0 483 aaKnown RBP11.27□□□□□ -0.61
VPS13B-212ENST00000524330 ZNF112Q9UJU3 913 aa11.27□□□□□ -0.61
VPS13B-212ENST00000524330 SHTN1A0MZ66 631 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 IKBKBO14920 756 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 TBX3O15119 743 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 ACTN4O43707 911 aaKnown RBP11.26□□□□□ -0.61
VPS13B-212ENST00000524330 ADCY5O95622 1261 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 SLURP2P0DP57 97 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 PPP1R2P41236 205 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
VPS13B-212ENST00000524330 PNOCQ13519 176 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 ZYXQ15942 572 aaKnown RBP11.26□□□□□ -0.61
VPS13B-212ENST00000524330 USH1GQ495M9 461 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
VPS13B-212ENST00000524330 NOL9Q5SY16 702 aaKnown RBP11.26□□□□□ -0.61
VPS13B-212ENST00000524330 NBPF12Q5TAG4 269 aaPredicted RBP11.26□□□□□ -0.61
VPS13B-212ENST00000524330 KRT79Q5XKE5 535 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 ERMNQ8TAM6 284 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
VPS13B-212ENST00000524330 WRNIP1Q96S55 665 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms