RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 NOP58Q9Y2X3 529 aaKnown RBP11.17□□□□□ -0.62
PTPN12-216ENST00000523952 RIPK3Q9Y572 518 aa11.17□□□□□ -0.62
PTPN12-216ENST00000523952 PIEZO1Q92508 2521 aa11.17□□□□□ -0.62
PTPN12-216ENST00000523952 CYP2D7A0A087X1C5 515 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 ASB14A6NK59 587 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 USP17L12C9JPN9 530 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 USP17L21D6R901 530 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 B4GALT4O60513 344 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 SUPT20HL2P0C7V6 817 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
PTPN12-216ENST00000523952 SSTR3P32745 418 aaPredicted RBP11.16□□□□□ -0.62
PTPN12-216ENST00000523952 C12orf60Q5U649 245 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 C16orf86Q6ZW13 317 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
PTPN12-216ENST00000523952 TMEM57Q8N5G2 664 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 CHST13Q8NET6 341 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 FTOQ9C0B1 505 aaKnown RBP eCLIP11.16□□□□□ -0.626e-10■■■□□ 16.4
PTPN12-216ENST00000523952 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.16□□□□□ -0.627e-13■■■□□ 17.2
PTPN12-216ENST00000523952 WNT8AQ9H1J5 351 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 MKNK2Q9HBH9 465 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 TNNQ9UQP3 1299 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 SCN10AQ9Y5Y9 1956 aa11.16□□□□□ -0.62
PTPN12-216ENST00000523952 KIAA1217Q5T5P2 1943 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.15□□□□□ -0.62
PTPN12-216ENST00000523952 DYNC1LI2O43237 492 aaPredicted RBP11.15□□□□□ -0.62
PTPN12-216ENST00000523952 PRKAB2O43741 272 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 KCNJ6P48051 423 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 PSMC6P62333 389 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
PTPN12-216ENST00000523952 TTLL4Q14679 1199 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 FAM47CQ5HY64 1035 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 ZKSCAN2Q63HK3 967 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 KRT40Q6A162 431 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 ITPRIPQ8IWB1 547 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 SLC43A3Q8NBI5 491 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 GPHNQ9NQX3 736 aaPredicted RBP11.15□□□□□ -0.62
PTPN12-216ENST00000523952 METRNQ9UJH8 293 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 EXOC6BQ9Y2D4 811 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 COG6Q9Y2V7 657 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
PTPN12-216ENST00000523952 PRR33A8MZF0 331 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 F5H6K3 240 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 ATP2A1O14983 1001 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 CTAGE5O15320 804 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 IFIT2P09913 472 aaKnown RBP11.14□□□□□ -0.63
PTPN12-216ENST00000523952 KLRC3Q07444 240 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 HSP90AB4PQ58FF6 505 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 ZBED2Q9BTP6 218 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 ACAD9Q9H845 621 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 IL1RAPL2Q9NP60 686 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 FEM1BQ9UK73 627 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 MICAL3Q7RTP6 2002 aa11.14□□□□□ -0.63
PTPN12-216ENST00000523952 TNKSO95271 1327 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 RALGAPA2Q2PPJ7 1873 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 TCRBV5S4A2TA0A5A2 114 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 PI4K2BG5E9Z4 385 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 NDUFB10O96000 172 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 CYP2C9P11712 490 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 RFC2P35250 354 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 MRE11P49959 708 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 OAZ1P54368 228 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 CNTN2Q02246 1040 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 TAP1Q03518 808 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 GRB10Q13322 594 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 IQSEC1Q6DN90 963 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 EEPD1Q7L9B9 569 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 CLASRPQ8N2M8 674 aaKnown RBP11.13□□□□□ -0.63
PTPN12-216ENST00000523952 PHOSPHO2Q8TCD6 241 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 ALDH8A1Q9H2A2 487 aaPredicted RBP11.13□□□□□ -0.63
PTPN12-216ENST00000523952 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 POLR3EQ9NVU0 708 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 PAG1Q9NWQ8 432 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 NYAP2Q9P242 653 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 ARPP21Q9UBL0 812 aaPredicted RBP11.13□□□□□ -0.63
PTPN12-216ENST00000523952 CLIP2Q9UDT6 1046 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 NOD1Q9Y239 953 aa11.13□□□□□ -0.63
PTPN12-216ENST00000523952 ASTN1O14525 1302 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 ZNF536O15090 1300 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 EPOPA6NHQ4 379 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 MYL3P08590 195 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 FDX1P10109 184 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 ALADP13716 330 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 SMPD1P17405 629 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 ADD2P35612 726 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 NKX3-2P78367 333 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 BRDTQ58F21 947 aaPredicted RBP11.12□□□□□ -0.63
PTPN12-216ENST00000523952 KIAA1211Q6ZU35 1233 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 HERC6Q8IVU3 1022 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTPN12-216ENST00000523952 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.637e-8■■■□□ 17.2
PTPN12-216ENST00000523952 FGD4Q96M96 766 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 AGBL1Q96MI9 1066 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 ZNF287Q9HBT7 754 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 C11orf16Q9NQ32 467 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 RNF146Q9NTX7 359 aa11.12□□□□□ -0.63
PTPN12-216ENST00000523952 TRMT13Q9NUP7 481 aaKnown RBP11.12□□□□□ -0.63
PTPN12-216ENST00000523952 GNEQ9Y223 722 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms