RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 IKQ13123 557 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-211ENST00000523441 TMED8Q6PL24 325 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-211ENST00000523441 ZNF467Q7Z7K2 595 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-211ENST00000523441 ALYREFQ86V81 257 aaKnown RBP13.94□□□□□ -0.18
SDCBP-211ENST00000523441 PDGFCQ9NRA1 345 aa13.94□□□□□ -0.18
SDCBP-211ENST00000523441 TRMT13Q9NUP7 481 aaKnown RBP13.94□□□□□ -0.18
SDCBP-211ENST00000523441 GREB1LQ9C091 1923 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-211ENST00000523441 PRDM1O75626 825 aa13.93□□□□□ -0.18
SDCBP-211ENST00000523441 SMPD1P17405 629 aa13.93□□□□□ -0.18
SDCBP-211ENST00000523441 FAM47CQ5HY64 1035 aa13.93□□□□□ -0.18
SDCBP-211ENST00000523441 SPRED2Q7Z698 418 aa13.93□□□□□ -0.18
SDCBP-211ENST00000523441 FBXO16Q8IX29 292 aaPredicted RBP13.93□□□□□ -0.18
SDCBP-211ENST00000523441 CLASRPQ8N2M8 674 aaKnown RBP13.93□□□□□ -0.18
SDCBP-211ENST00000523441 UIMC1Q96RL1 719 aa13.93□□□□□ -0.18
SDCBP-211ENST00000523441 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.93□□□□□ -0.18
SDCBP-211ENST00000523441 SOWAHBA6NEL2 793 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 ZEB2O60315 1214 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 ARHGEF15O94989 841 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 MYL3P08590 195 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 HLA-CQ95604 372 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 AGBL1Q96MI9 1066 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 FTOQ9C0B1 505 aaKnown RBP eCLIP13.92□□□□□ -0.18
SDCBP-211ENST00000523441 KATNBL1Q9H079 304 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 FBXO40Q9UH90 709 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 COG6Q9Y2V7 657 aa13.92□□□□□ -0.18
SDCBP-211ENST00000523441 TLL1O43897 1013 aa13.91□□□□□ -0.18
SDCBP-211ENST00000523441 ALAS1P13196 640 aa13.91□□□□□ -0.18
SDCBP-211ENST00000523441 RASA1P20936 1047 aa13.91□□□□□ -0.18
SDCBP-211ENST00000523441 TMCO2Q7Z6W1 182 aaPredicted RBP13.91□□□□□ -0.18
SDCBP-211ENST00000523441 SLC43A3Q8NBI5 491 aa13.91□□□□□ -0.18
SDCBP-211ENST00000523441 CHST13Q8NET6 341 aa13.91□□□□□ -0.18
SDCBP-211ENST00000523441 PURBQ96QR8 312 aaKnown RBP13.91□□□□□ -0.18
SDCBP-211ENST00000523441 PUS7LQ9H0K6 701 aaKnown RBP13.91□□□□□ -0.18
SDCBP-211ENST00000523441 ACAD9Q9H845 621 aa13.91□□□□□ -0.18
SDCBP-211ENST00000523441 SLC38A10Q9HBR0 1119 aa13.91□□□□□ -0.18
SDCBP-211ENST00000523441 RNF146Q9NTX7 359 aa13.91□□□□□ -0.18
SDCBP-211ENST00000523441 MTUS1Q9ULD2 1270 aa13.91□□□□□ -0.18
SDCBP-211ENST00000523441 PTPRSQ13332 1948 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 TMEM232C9JQI7 657 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 CABYRO75952 493 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 ACTN1P12814 892 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 PANK1Q8TE04 598 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 VWCEQ96DN2 955 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 ALDH8A1Q9H2A2 487 aaPredicted RBP13.9□□□□□ -0.18
SDCBP-211ENST00000523441 A1CFQ9NQ94 594 aaKnown RBP13.9□□□□□ -0.18
SDCBP-211ENST00000523441 NYAP2Q9P242 653 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 FEM1BQ9UK73 627 aa13.9□□□□□ -0.18
SDCBP-211ENST00000523441 GNEQ9Y223 722 aaKnown RBP13.9□□□□□ -0.18
SDCBP-211ENST00000523441 TNKSO95271 1327 aa13.9□□□□□ -0.19
SDCBP-211ENST00000523441 ASB14A6NK59 587 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 APPP05067 770 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 BMP3P12645 472 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 TAP1Q03518 808 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 GRB10Q13322 594 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 HSP90AB4PQ58FF6 505 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 SLFN13Q68D06 897 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 NSMFQ6X4W1 530 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 FAM133AQ8N9E0 248 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 GDPD5Q8WTR4 605 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 KIF1BPQ96EK5 621 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 CEP95Q96GE4 821 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 CD320Q9NPF0 282 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 C11orf16Q9NQ32 467 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 ARPP21Q9UBL0 812 aaPredicted RBP13.89□□□□□ -0.19
SDCBP-211ENST00000523441 COG5Q9UP83 839 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 LCTP09848 1927 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 TRIP12Q14669 1992 aaPredicted RBP13.89□□□□□ -0.19
SDCBP-211ENST00000523441 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
SDCBP-211ENST00000523441 ATP2A1O14983 1001 aa13.88□□□□□ -0.19
SDCBP-211ENST00000523441 MUM1L1Q5H9M0 696 aa13.88□□□□□ -0.19
SDCBP-211ENST00000523441 ZNF444Q8N0Y2 327 aaPredicted RBP13.88□□□□□ -0.19
SDCBP-211ENST00000523441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.88□□□□□ -0.19
SDCBP-211ENST00000523441 KIF28PB7ZC32 967 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 SSTR3P32745 418 aaPredicted RBP13.87□□□□□ -0.19
SDCBP-211ENST00000523441 TDO2P48775 406 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 TAPT1Q6NXT6 567 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 KCTD1Q719H9 257 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 HERC6Q8IVU3 1022 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 RETREG2Q8NC44 543 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 ZBED2Q9BTP6 218 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 GPHNQ9NQX3 736 aaPredicted RBP13.87□□□□□ -0.19
SDCBP-211ENST00000523441 MUC6Q6W4X9 2439 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 ZBED9Q6R2W3 1325 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 TET1Q8NFU7 2136 aa13.87□□□□□ -0.19
SDCBP-211ENST00000523441 LCHNA4D1U4 455 aa13.86□□□□□ -0.19
SDCBP-211ENST00000523441 SUPT20HL2P0C7V6 817 aa13.86□□□□□ -0.19
SDCBP-211ENST00000523441 UBE3CQ15386 1083 aa13.86□□□□□ -0.19
SDCBP-211ENST00000523441 ZSCAN25Q6NSZ9 544 aa13.86□□□□□ -0.19
SDCBP-211ENST00000523441 FAM117BQ6P1L5 589 aa13.86□□□□□ -0.19
SDCBP-211ENST00000523441 RASGRP2Q7LDG7 609 aa13.86□□□□□ -0.19
SDCBP-211ENST00000523441 SLC9A7Q96T83 725 aa13.86□□□□□ -0.19
SDCBP-211ENST00000523441 HAUS7Q99871 368 aa13.86□□□□□ -0.19
SDCBP-211ENST00000523441 NOD1Q9Y239 953 aa13.86□□□□□ -0.19
SDCBP-211ENST00000523441 GSG1L2A8MUP6 293 aa13.85□□□□□ -0.19
SDCBP-211ENST00000523441 SMARCA5O60264 1052 aaPredicted RBP13.85□□□□□ -0.19
SDCBP-211ENST00000523441 GPR37L1O60883 481 aa13.85□□□□□ -0.19
SDCBP-211ENST00000523441 TTLL1O95922 423 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms