RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 PRAMEF18Q5VWM3 479 aa23.61■■□□□ 1.37
SQLE-206ENST00000523430 APOBEC3FQ8IUX4 373 aaKnown RBP23.61■■□□□ 1.37
SQLE-206ENST00000523430 USP17L15C9J2P7 530 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 USP17L13C9JLJ4 530 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 USP17L11C9JVI0 530 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 USP17L18D6R9N7 530 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 USP17L22D6RA61 530 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 USP17L17D6RBQ6 530 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 USP17L19D6RCP7 530 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 USP17L20D6RJB6 530 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 LAD1O00515 517 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 OR52Z1P0C646 297 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 LONP1P36776 959 aaKnown RBP23.6■■□□□ 1.37
SQLE-206ENST00000523430 HIRAP54198 1017 aaPredicted RBP23.6■■□□□ 1.37
SQLE-206ENST00000523430 USP17L24Q0WX57 530 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 IQCB1Q15051 598 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 ZRSR1Q15695 479 aaKnown RBP23.6■■□□□ 1.37
SQLE-206ENST00000523430 ISM2Q6H9L7 571 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 USP17L6PQ6QN14 398 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 DTHD1Q6ZMT9 781 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 FBXO11Q86XK2 927 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 POTEDQ86YR6 584 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 ELOA2Q8IYF1 753 aaPredicted RBP23.6■■□□□ 1.37
SQLE-206ENST00000523430 CEP57L1Q8IYX8 460 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 FEZ1Q99689 392 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 RNF181Q9P0P0 153 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 DOCK1Q14185 1865 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 TDP2O95551 362 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 INPP5BP32019 993 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 NLRP12P59046 1061 aa23.6■■□□□ 1.37
SQLE-206ENST00000523430 PP2D1A8MPX8 630 aa23.59■■□□□ 1.37
SQLE-206ENST00000523430 DDNO94850 711 aaPredicted RBP23.59■■□□□ 1.37
SQLE-206ENST00000523430 CDC25AP30304 524 aa23.59■■□□□ 1.37
SQLE-206ENST00000523430 PRPHP41219 470 aa23.59■■□□□ 1.37
SQLE-206ENST00000523430 PLCB2Q00722 1185 aa23.59■■□□□ 1.37
SQLE-206ENST00000523430 PCDHA5Q9Y5H7 936 aa23.59■■□□□ 1.37
SQLE-206ENST00000523430 SSC5DA1L4H1 1573 aa23.59■■□□□ 1.37
SQLE-206ENST00000523430 SLC37A4O43826 429 aa23.58■■□□□ 1.37
SQLE-206ENST00000523430 ADCY5O95622 1261 aa23.58■■□□□ 1.37
SQLE-206ENST00000523430 DHX40Q8IX18 779 aaKnown RBP23.58■■□□□ 1.37
SQLE-206ENST00000523430 KIFC2Q96AC6 838 aa23.58■■□□□ 1.37
SQLE-206ENST00000523430 HOOK1Q9UJC3 728 aaKnown RBP23.58■■□□□ 1.37
SQLE-206ENST00000523430 FZD1Q9UP38 647 aa23.58■■□□□ 1.37
SQLE-206ENST00000523430 CTNND1O60716 968 aaKnown RBP23.58■■□□□ 1.36
SQLE-206ENST00000523430 ORC2Q13416 577 aaPredicted RBP23.58■■□□□ 1.36
SQLE-206ENST00000523430 DGKZQ13574 1117 aa23.58■■□□□ 1.36
SQLE-206ENST00000523430 E2F4Q16254 413 aa23.58■■□□□ 1.36
SQLE-206ENST00000523430 SLFN14P0C7P3 912 aa23.57■■□□□ 1.36
SQLE-206ENST00000523430 FBXO28Q9NVF7 368 aa23.57■■□□□ 1.36
SQLE-206ENST00000523430 MEIS2O14770 477 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 OPLAHO14841 1288 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 DCAF15Q66K64 600 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 P2RX7Q99572 595 aaKnown RBP23.56■■□□□ 1.36
SQLE-206ENST00000523430 GLT8D2Q9H1C3 349 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 RANBP17Q9H2T7 1088 aaKnown RBP23.56■■□□□ 1.36
SQLE-206ENST00000523430 MYH7BA7E2Y1 1941 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 KARSQ15046 597 aaKnown RBP23.56■■□□□ 1.36
SQLE-206ENST00000523430 KANK3Q6NY19 840 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 CCDC174Q6PII3 467 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 AOPEPQ8N6M6 819 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 TRIM44Q96DX7 344 aaPredicted RBP23.56■■□□□ 1.36
SQLE-206ENST00000523430 PAGE5Q96GU1 130 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 ANO3Q9BYT9 981 aa23.56■■□□□ 1.36
SQLE-206ENST00000523430 NAT10Q9H0A0 1025 aaKnown RBP23.56■■□□□ 1.36
SQLE-206ENST00000523430 TXLNAP40222 546 aa23.55■■□□□ 1.36
SQLE-206ENST00000523430 AFMP43652 599 aa23.55■■□□□ 1.36
SQLE-206ENST00000523430 PDXDC2PQ6P474 469 aa23.55■■□□□ 1.36
SQLE-206ENST00000523430 SAMD1Q6SPF0 538 aaPredicted RBP23.55■■□□□ 1.36
SQLE-206ENST00000523430 SH3RF1Q7Z6J0 888 aa23.55■■□□□ 1.36
SQLE-206ENST00000523430 MAN1B1Q9UKM7 699 aa23.55■■□□□ 1.36
SQLE-206ENST00000523430 CASP1P29466 404 aa23.54■■□□□ 1.36
SQLE-206ENST00000523430 CALCRLQ16602 461 aa23.54■■□□□ 1.36
SQLE-206ENST00000523430 NT5DC1Q5TFE4 455 aa23.54■■□□□ 1.36
SQLE-206ENST00000523430 CHURC1Q8WUH1 139 aa23.54■■□□□ 1.36
SQLE-206ENST00000523430 MTMR9Q96QG7 549 aa23.54■■□□□ 1.36
SQLE-206ENST00000523430 WRNIP1Q96S55 665 aa23.54■■□□□ 1.36
SQLE-206ENST00000523430 GINM1Q9NU53 330 aa23.54■■□□□ 1.36
SQLE-206ENST00000523430 PLA2G6O60733 806 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 BMP6P22004 513 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 C9orf131Q5VYM1 1079 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 FAM160B2Q86V87 743 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 IQUBQ8NA54 791 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 SMARCE1Q969G3 411 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 ZKSCAN4Q969J2 545 aaPredicted RBP23.53■■□□□ 1.36
SQLE-206ENST00000523430 KIAA1683Q9H0B3 1180 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 FEM1BQ9UK73 627 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 GOLGA6L19H0YKK7 550 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 SARSP49591 514 aaKnown RBP23.53■■□□□ 1.36
SQLE-206ENST00000523430 AP3B2Q13367 1082 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 MTMR2Q13614 643 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 PPP4R3AQ6IN85 833 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 SCYL3Q8IZE3 742 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 BPIFA3Q9BQP9 254 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 DISC1Q9NRI5 854 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 ZNF112Q9UJU3 913 aa23.53■■□□□ 1.36
SQLE-206ENST00000523430 BECN2A8MW95 431 aa23.52■■□□□ 1.36
SQLE-206ENST00000523430 TECP42680 631 aa23.52■■□□□ 1.36
SQLE-206ENST00000523430 STAMQ92783 540 aa23.52■■□□□ 1.36
SQLE-206ENST00000523430 PYM1Q9BRP8 204 aaKnown RBP23.52■■□□□ 1.36
SQLE-206ENST00000523430 DDX25Q9UHL0 483 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms