RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 TBCKQ8TEA7 893 aa17.21■□□□□ 0.35
CSGALNACT1-211ENST00000522854 CUL5Q93034 780 aa17.21■□□□□ 0.35
CSGALNACT1-211ENST00000522854 NOL7Q9UMY1 257 aaKnown RBP17.21■□□□□ 0.35
CSGALNACT1-211ENST00000522854 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
CSGALNACT1-211ENST00000522854 MYH7BA7E2Y1 1941 aa17.21■□□□□ 0.35
CSGALNACT1-211ENST00000522854 RLFQ13129 1914 aa17.21■□□□□ 0.35
CSGALNACT1-211ENST00000522854 SYCE3A1L190 88 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 EDIL3O43854 480 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PEX10O60683 326 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 USP14P54578 494 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 LETM2Q2VYF4 491 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 TREML2Q5T2D2 321 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ADALQ6DHV7 355 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 FSIP1Q8NA03 581 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ZNF536O15090 1300 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 MEIS2O14770 477 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CLK2P49760 499 aaKnown RBP17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PTGDRQ13258 359 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 NONOQ15233 471 aaKnown RBP eCLIP17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PPP1R18Q6NYC8 613 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 SHC4Q6S5L8 630 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 FAM160B2Q86V87 743 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ATG4CQ96DT6 458 aa17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 RAVER2Q9HCJ3 691 aaKnown RBP17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 FBXO2Q9UK22 296 aaPredicted RBP17.2■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PCNTO95613 3336 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 NDUFA8P51970 172 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ANKRD13AQ8IZ07 590 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PRPF38AQ8NAV1 312 aaKnown RBP17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 HOMER2Q9NSB8 354 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PLA2G6O60733 806 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PPP6R2O75170 966 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 GSE1Q14687 1217 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 USP49Q70CQ1 688 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 KRT25Q7Z3Z0 450 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 LDHDQ86WU2 507 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 UIMC1Q96RL1 719 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PPP1R9AQ9ULJ8 1098 aa17.19■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CCNT1O60563 726 aaKnown RBP17.18■□□□□ 0.34
CSGALNACT1-211ENST00000522854 MRPL12P52815 198 aaKnown RBP17.18■□□□□ 0.34
CSGALNACT1-211ENST00000522854 IL17AQ16552 155 aa17.18■□□□□ 0.34
CSGALNACT1-211ENST00000522854 GAS2L3Q86XJ1 694 aa17.18■□□□□ 0.34
CSGALNACT1-211ENST00000522854 OPTNQ96CV9 577 aa17.18■□□□□ 0.34
CSGALNACT1-211ENST00000522854 C19orf81C9J6K1 198 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CFBP00751 764 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 GJA5P36382 358 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 MKRN3Q13064 507 aaKnown RBP17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 C4orf32Q8N8J7 132 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 KRI1Q8N9T8 703 aaKnown RBP17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 MRPS27Q92552 414 aaKnown RBP17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 C12orf42Q96LP6 360 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CSRNP2Q9H175 543 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 TMOD4Q9NZQ9 345 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CCPG1Q9ULG6 757 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 TDP2O95551 362 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PFKFB1P16118 471 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PTPREP23469 700 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 TRAPPC10P48553 1259 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 MAP3K11Q16584 847 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 NEK8Q86SG6 692 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 FAM177A1Q8N128 213 aaPredicted RBP17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ENGASEQ8NFI3 743 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ERCC4Q92889 916 aaPredicted RBP17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 PANK2Q9BZ23 570 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 SLC38A10Q9HBR0 1119 aa17.17■□□□□ 0.34
CSGALNACT1-211ENST00000522854 VWA3AA6NCI4 1184 aa17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 VWA5AO00534 786 aa17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 NFIBO00712 420 aa17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ATP2C1P98194 919 aaPredicted RBP17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 GADL1Q6ZQY3 521 aa17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ARMC9Q7Z3E5 817 aa17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 FCHSD1Q86WN1 690 aa17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ERO1BQ86YB8 467 aa17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 GJA10Q969M2 543 aa17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CEP131Q9UPN4 1083 aa17.16■□□□□ 0.34
CSGALNACT1-211ENST00000522854 A0A1W2PQ27 194 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 A0A1W2PQ64 194 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 A0A1W2PQD8 194 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 SPDYE5A6NIY4 337 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 SLC37A4O43826 429 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ICAM1P05362 532 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ALAS1P13196 640 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 MUM1L1Q5H9M0 696 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CCDC183Q5T5S1 534 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 POTEEQ6S8J3 1075 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CATSPERGQ6ZRH7 1159 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CCDC73Q6ZRK6 1079 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 JMYQ8N9B5 988 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 ANO3Q9BYT9 981 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 RIPK3Q9Y572 518 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 SRPRBQ9Y5M8 271 aaKnown RBP17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CUTAO60888 179 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CELF2O95319 508 aaKnown RBP17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CMA1P23946 247 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 CDC25AP30304 524 aa17.15■□□□□ 0.34
CSGALNACT1-211ENST00000522854 UBXN2AP68543 259 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms