RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 TRIM6-TRIM34B2RNG4 842 aa24.6■■□□□ 1.53
PABPC1-218ENST00000521865 SLC16A2P36021 539 aa24.6■■□□□ 1.53
PABPC1-218ENST00000521865 CDK7P50613 346 aa24.6■■□□□ 1.53
PABPC1-218ENST00000521865 ALX1Q15699 326 aa24.6■■□□□ 1.53
PABPC1-218ENST00000521865 MFSD5Q6N075 450 aa24.6■■□□□ 1.53
PABPC1-218ENST00000521865 TLK2Q86UE8 772 aa24.6■■□□□ 1.53
PABPC1-218ENST00000521865 MYLIPQ8WY64 445 aa24.6■■□□□ 1.53
PABPC1-218ENST00000521865 PPP1R12CQ9BZL4 782 aa24.6■■□□□ 1.53
PABPC1-218ENST00000521865 CYP39A1Q9NYL5 469 aa24.6■■□□□ 1.53
PABPC1-218ENST00000521865 DDX49Q9Y6V7 483 aaKnown RBP24.6■■□□□ 1.53
PABPC1-218ENST00000521865 A0A0D9SFI3 127 aa24.59■■□□□ 1.53
PABPC1-218ENST00000521865 FGAP02671 866 aa24.59■■□□□ 1.53
PABPC1-218ENST00000521865 ICAM1P05362 532 aa24.59■■□□□ 1.53
PABPC1-218ENST00000521865 PPIGQ13427 754 aaKnown RBP eCLIP24.59■■□□□ 1.53
PABPC1-218ENST00000521865 HDAC1Q13547 482 aaPredicted RBP24.59■■□□□ 1.53
PABPC1-218ENST00000521865 TTBK2Q6IQ55 1244 aa24.59■■□□□ 1.53
PABPC1-218ENST00000521865 CXCL17Q6UXB2 119 aa24.59■■□□□ 1.53
PABPC1-218ENST00000521865 FBXO16Q8IX29 292 aaPredicted RBP24.59■■□□□ 1.53
PABPC1-218ENST00000521865 TMEM199Q8N511 208 aa24.59■■□□□ 1.53
PABPC1-218ENST00000521865 MAFAQ8NHW3 353 aaPredicted RBP24.59■■□□□ 1.53
PABPC1-218ENST00000521865 FRMPD2Q68DX3 1309 aaPredicted RBP24.59■■□□□ 1.53
PABPC1-218ENST00000521865 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.58■■□□□ 1.53
PABPC1-218ENST00000521865 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.58■■□□□ 1.53
PABPC1-218ENST00000521865 CTAGE5O15320 804 aa24.58■■□□□ 1.53
PABPC1-218ENST00000521865 DYNC1LI2O43237 492 aaPredicted RBP24.58■■□□□ 1.53
PABPC1-218ENST00000521865 ZEB2O60315 1214 aa24.58■■□□□ 1.53
PABPC1-218ENST00000521865 TOP1P11387 765 aaKnown RBP24.58■■□□□ 1.53
PABPC1-218ENST00000521865 FSCN1Q16658 493 aaKnown RBP24.58■■□□□ 1.53
PABPC1-218ENST00000521865 SYDE2Q5VT97 1194 aa24.58■■□□□ 1.53
PABPC1-218ENST00000521865 RILPL2Q969X0 211 aa24.58■■□□□ 1.53
PABPC1-218ENST00000521865 TMEM47Q9BQJ4 181 aa24.58■■□□□ 1.53
PABPC1-218ENST00000521865 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.58■■□□□ 1.53
PABPC1-218ENST00000521865 GPCPD1Q9NPB8 672 aa24.58■■□□□ 1.53
PABPC1-218ENST00000521865 FGRP09769 529 aa24.57■■□□□ 1.52
PABPC1-218ENST00000521865 HSPD1P10809 573 aaKnown RBP24.57■■□□□ 1.52
PABPC1-218ENST00000521865 FOSL2P15408 326 aa24.57■■□□□ 1.52
PABPC1-218ENST00000521865 SMPD1P17405 629 aa24.57■■□□□ 1.52
PABPC1-218ENST00000521865 HAND2P61296 217 aa24.57■■□□□ 1.52
PABPC1-218ENST00000521865 NMIQ13287 307 aaPredicted RBP24.57■■□□□ 1.52
PABPC1-218ENST00000521865 FAM126BQ8IXS8 530 aa24.57■■□□□ 1.52
PABPC1-218ENST00000521865 PURBQ96QR8 312 aaKnown RBP24.57■■□□□ 1.52
PABPC1-218ENST00000521865 LNPKQ9C0E8 428 aa24.57■■□□□ 1.52
PABPC1-218ENST00000521865 RANBP17Q9H2T7 1088 aaKnown RBP24.57■■□□□ 1.52
PABPC1-218ENST00000521865 PDGFCQ9NRA1 345 aa24.57■■□□□ 1.52
PABPC1-218ENST00000521865 GNEQ9Y223 722 aaKnown RBP24.57■■□□□ 1.52
PABPC1-218ENST00000521865 ASTN1O14525 1302 aa24.57■■□□□ 1.52
PABPC1-218ENST00000521865 TMEM265A0A087WTH1 108 aa24.56■■□□□ 1.52
PABPC1-218ENST00000521865 CABYRO75952 493 aa24.56■■□□□ 1.52
PABPC1-218ENST00000521865 CSF2RAP15509 400 aa24.56■■□□□ 1.52
PABPC1-218ENST00000521865 NOVP48745 357 aa24.56■■□□□ 1.52
PABPC1-218ENST00000521865 KIAA1211Q6ZU35 1233 aa24.56■■□□□ 1.52
PABPC1-218ENST00000521865 ADD3Q9UEY8 706 aaKnown RBP24.56■■□□□ 1.52
PABPC1-218ENST00000521865 PTPDC1A2A3K4 754 aa24.55■■□□□ 1.52
PABPC1-218ENST00000521865 PTGS1P23219 599 aa24.55■■□□□ 1.52
PABPC1-218ENST00000521865 DNAJB2P25686 324 aa24.55■■□□□ 1.52
PABPC1-218ENST00000521865 NKX3-2P78367 333 aa24.55■■□□□ 1.52
PABPC1-218ENST00000521865 BAATQ14032 418 aaPredicted RBP24.55■■□□□ 1.52
PABPC1-218ENST00000521865 IQSEC1Q6DN90 963 aa24.55■■□□□ 1.52
PABPC1-218ENST00000521865 ZNF589Q86UQ0 364 aaPredicted RBP24.55■■□□□ 1.52
PABPC1-218ENST00000521865 VTA1Q9NP79 307 aa24.55■■□□□ 1.52
PABPC1-218ENST00000521865 ACRP10323 421 aa24.54■■□□□ 1.52
PABPC1-218ENST00000521865 ITGA7Q13683 1181 aa24.54■■□□□ 1.52
PABPC1-218ENST00000521865 B4GALNT3Q6L9W6 998 aa24.54■■□□□ 1.52
PABPC1-218ENST00000521865 TAPT1Q6NXT6 567 aa24.54■■□□□ 1.52
PABPC1-218ENST00000521865 BTNL9Q6UXG8 535 aa24.54■■□□□ 1.52
PABPC1-218ENST00000521865 MFSD6Q6ZSS7 791 aa24.54■■□□□ 1.52
PABPC1-218ENST00000521865 COL25A1Q9BXS0 654 aaPredicted RBP24.54■■□□□ 1.52
PABPC1-218ENST00000521865 TCP11L1Q9NUJ3 509 aa24.54■■□□□ 1.52
PABPC1-218ENST00000521865 CCDC171Q6TFL3 1326 aa24.54■■□□□ 1.52
PABPC1-218ENST00000521865 NFIBO00712 420 aa24.53■■□□□ 1.52
PABPC1-218ENST00000521865 CYP2C18P33260 490 aa24.53■■□□□ 1.52
PABPC1-218ENST00000521865 TMEM240Q5SV17 173 aa24.53■■□□□ 1.52
PABPC1-218ENST00000521865 PSRC1Q6PGN9 363 aaPredicted RBP24.53■■□□□ 1.52
PABPC1-218ENST00000521865 TICAM2Q86XR7 235 aa24.53■■□□□ 1.52
PABPC1-218ENST00000521865 CD4P01730 458 aa24.52■■□□□ 1.52
PABPC1-218ENST00000521865 CALML3P27482 149 aa24.52■■□□□ 1.52
PABPC1-218ENST00000521865 ALDH5A1P51649 535 aaPredicted RBP24.52■■□□□ 1.52
PABPC1-218ENST00000521865 MFAP1P55081 439 aaKnown RBP24.52■■□□□ 1.52
PABPC1-218ENST00000521865 AKNAD1Q5T1N1 836 aa24.52■■□□□ 1.52
PABPC1-218ENST00000521865 C16orf59Q7L2K0 433 aa24.52■■□□□ 1.52
PABPC1-218ENST00000521865 TIFAQ96CG3 184 aa24.52■■□□□ 1.52
PABPC1-218ENST00000521865 HIPK3Q9H422 1215 aa24.52■■□□□ 1.52
PABPC1-218ENST00000521865 Q9Y3F1 56 aa24.52■■□□□ 1.52
PABPC1-218ENST00000521865 ZMYM6O95789 1325 aa24.52■■□□□ 1.52
PABPC1-218ENST00000521865 MCM3APO60318 1980 aa24.51■■□□□ 1.51
PABPC1-218ENST00000521865 UNC80Q8N2C7 3258 aa24.51■■□□□ 1.51
PABPC1-218ENST00000521865 PDHBP11177 359 aa24.51■■□□□ 1.51
PABPC1-218ENST00000521865 TMEM63BQ5T3F8 832 aa24.51■■□□□ 1.51
PABPC1-218ENST00000521865 ZNF365Q70YC5 407 aa24.51■■□□□ 1.51
PABPC1-218ENST00000521865 RNF41Q9H4P4 317 aaPredicted RBP24.51■■□□□ 1.51
PABPC1-218ENST00000521865 PNMA2Q9UL42 364 aa24.51■■□□□ 1.51
PABPC1-218ENST00000521865 PCP11498 1178 aaKnown RBP24.5■■□□□ 1.51
PABPC1-218ENST00000521865 PSMC6P62333 389 aa24.5■■□□□ 1.51
PABPC1-218ENST00000521865 GRIN2CQ14957 1233 aa24.5■■□□□ 1.51
PABPC1-218ENST00000521865 SLC43A3Q8NBI5 491 aa24.5■■□□□ 1.51
PABPC1-218ENST00000521865 MORC4Q8TE76 937 aa24.5■■□□□ 1.51
PABPC1-218ENST00000521865 TTC14Q96N46 770 aa24.5■■□□□ 1.51
PABPC1-218ENST00000521865 MPHOSPH6Q99547 160 aaKnown RBP24.5■■□□□ 1.51
PABPC1-218ENST00000521865 WDR11Q9BZH6 1224 aa24.5■■□□□ 1.51
PABPC1-218ENST00000521865 RWDD1Q9H446 243 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms