RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ATP6V1DQ9Y5K8 247 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 GADD45BO75293 160 aaPredicted RBP17.25■□□□□ 0.35
SREK1-209ENST00000520953 PRPF40AO75400 957 aaKnown RBP17.25■□□□□ 0.35
SREK1-209ENST00000520953 SNAPC2Q13487 334 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 SPRYD7Q5W111 196 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 PROCA1Q8NCQ7 364 aaPredicted RBP17.25■□□□□ 0.35
SREK1-209ENST00000520953 C6orf50Q9HD87 102 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 HOMER2Q9NSB8 354 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 CCPG1Q9ULG6 757 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
SREK1-209ENST00000520953 ESYT2A0FGR8 921 aa17.24■□□□□ 0.35
SREK1-209ENST00000520953 hCG_1984214I3L0E3 225 aa17.24■□□□□ 0.35
SREK1-209ENST00000520953 HOXA13P31271 388 aaPredicted RBP17.24■□□□□ 0.35
SREK1-209ENST00000520953 TMEM132BQ14DG7 1078 aa17.24■□□□□ 0.35
SREK1-209ENST00000520953 ZNF713Q8N859 430 aaPredicted RBP17.24■□□□□ 0.35
SREK1-209ENST00000520953 CCDC12Q8WUD4 166 aaPredicted RBP17.24■□□□□ 0.35
SREK1-209ENST00000520953 BRI3BPQ8WY22 251 aa17.24■□□□□ 0.35
SREK1-209ENST00000520953 ASCC2Q9H1I8 757 aaPredicted RBP17.24■□□□□ 0.35
SREK1-209ENST00000520953 PSTPIP2Q9H939 334 aa17.24■□□□□ 0.35
SREK1-209ENST00000520953 BRMS1Q9HCU9 246 aa17.24■□□□□ 0.35
SREK1-209ENST00000520953 RIC8AQ9NPQ8 531 aa17.24■□□□□ 0.35
SREK1-209ENST00000520953 ADAMTS5Q9UNA0 930 aa17.24■□□□□ 0.35
SREK1-209ENST00000520953 AGTPBP1Q9UPW5 1226 aa17.24■□□□□ 0.35
SREK1-209ENST00000520953 ICAM1P05362 532 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 KRT85P78386 507 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 PPP1R18Q6NYC8 613 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 RASAL3Q86YV0 1011 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 PCDHB6Q9Y5E3 794 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 MRVI1Q9Y6F6 885 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 CCL15-CCL14A0A0B4J2E2 113 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 UNCXA6NJT0 531 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 MEIS2O14770 477 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 TOMM70O94826 608 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 ZNF157P51786 506 aaPredicted RBP17.23■□□□□ 0.35
SREK1-209ENST00000520953 CCL15Q16663 113 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 MUM1L1Q5H9M0 696 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
SREK1-209ENST00000520953 LEO1Q8WVC0 666 aaPredicted RBP17.23■□□□□ 0.35
SREK1-209ENST00000520953 R3HDMLQ9H3Y0 253 aa17.23■□□□□ 0.35
SREK1-209ENST00000520953 ZNF214Q9UL59 606 aaPredicted RBP17.23■□□□□ 0.35
SREK1-209ENST00000520953 NFIBO00712 420 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 CYP2C8P10632 490 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 XRCC6P12956 609 aaKnown RBP eCLIP17.22■□□□□ 0.35
SREK1-209ENST00000520953 ALAS1P13196 640 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 GNA11P29992 359 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
SREK1-209ENST00000520953 INF2Q27J81 1249 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 CUL5Q93034 780 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 PTPN18Q99952 460 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 BTBD7Q9P203 1132 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 EDIL3O43854 480 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 ZBED4O75132 1171 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 CLK2P49760 499 aaKnown RBP17.22■□□□□ 0.35
SREK1-209ENST00000520953 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
SREK1-209ENST00000520953 CLEC4DQ8WXI8 215 aa17.22■□□□□ 0.35
SREK1-209ENST00000520953 BTBD19C9JJ37 291 aa17.21■□□□□ 0.35
SREK1-209ENST00000520953 GALNT17Q6IS24 598 aa17.21■□□□□ 0.35
SREK1-209ENST00000520953 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
SREK1-209ENST00000520953 CCDC194A0A1B0GVG4 234 aa17.21■□□□□ 0.34
SREK1-209ENST00000520953 IRX3P78415 501 aaPredicted RBP17.21■□□□□ 0.34
SREK1-209ENST00000520953 PLS1Q14651 629 aa17.21■□□□□ 0.34
SREK1-209ENST00000520953 ANO1Q5XXA6 986 aa17.21■□□□□ 0.34
SREK1-209ENST00000520953 SNRNP48Q6IEG0 339 aaKnown RBP17.21■□□□□ 0.34
SREK1-209ENST00000520953 FASTKD5Q7L8L6 764 aaKnown RBP17.21■□□□□ 0.34
SREK1-209ENST00000520953 SPATA32Q96LK8 384 aa17.21■□□□□ 0.34
SREK1-209ENST00000520953 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.34
SREK1-209ENST00000520953 ZIC5Q96T25 663 aa17.21■□□□□ 0.34
SREK1-209ENST00000520953 TXNRD2Q9NNW7 524 aa17.21■□□□□ 0.34
SREK1-209ENST00000520953 ABT1Q9ULW3 272 aaKnown RBP17.21■□□□□ 0.34
SREK1-209ENST00000520953 TLL2Q9Y6L7 1015 aa17.21■□□□□ 0.34
SREK1-209ENST00000520953 A0A0G2JMZ2 1700 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 CFBP00751 764 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 GTF2A2P52657 109 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 HERVK_113P62684 666 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 ZNF174Q15697 407 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 RGMBQ6NW40 437 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 GAS2L3Q86XJ1 694 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 PAGR1Q9BTK6 254 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 RTEL1Q9NZ71 1219 aa17.2■□□□□ 0.34
SREK1-209ENST00000520953 CTDP1Q9Y5B0 961 aaPredicted RBP17.2■□□□□ 0.34
SREK1-209ENST00000520953 CNMDO75829 334 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 CETPP11597 493 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 MRPL12P52815 198 aaKnown RBP17.19■□□□□ 0.34
SREK1-209ENST00000520953 GRM1Q13255 1194 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 PTPAQ15257 358 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 TBCKQ8TEA7 893 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 PURBQ96QR8 312 aaKnown RBP17.19■□□□□ 0.34
SREK1-209ENST00000520953 ABCB11O95342 1321 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 PDHXO00330 501 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 ZBTB48P10074 688 aaPredicted RBP17.19■□□□□ 0.34
SREK1-209ENST00000520953 MARCKSP29966 332 aaPredicted RBP17.19■□□□□ 0.34
SREK1-209ENST00000520953 NASPP49321 788 aaPredicted RBP17.19■□□□□ 0.34
SREK1-209ENST00000520953 LBX2Q6XYB7 198 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 FCHSD1Q86WN1 690 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 LINC00301Q8NCQ3 95 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 GPT2Q8TD30 523 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 TRERF1Q96PN7 1200 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 POLR3EQ9NVU0 708 aa17.19■□□□□ 0.34
SREK1-209ENST00000520953 COL20A1Q9P218 1284 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms