RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 KIAA0825Q8IV33 1275 aa28.98■■■□□ 2.23
COL13A1-213ENST00000520267 CPLX3Q8WVH0 158 aa28.98■■■□□ 2.23
COL13A1-213ENST00000520267 ZDHHC15Q96MV8 337 aa28.98■■■□□ 2.23
COL13A1-213ENST00000520267 SIPA1L1O43166 1804 aa28.98■■■□□ 2.23
COL13A1-213ENST00000520267 EDIL3O43854 480 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 PPP1R11O60927 126 aaPredicted RBP28.97■■■□□ 2.23
COL13A1-213ENST00000520267 PPFIBP1Q86W92 1011 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 PANX2Q96RD6 677 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 CUEDC2Q9H467 287 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 DNAJC18Q9H819 358 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 PNMA6FA0A0J9YX94 578 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 TRIM49BA6NDI0 452 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 RHOBTB3O94955 611 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 TCP11X2Q5H9J9 407 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 PDCL2Q8N4E4 241 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 MMTAG2Q9BU76 263 aaKnown RBP28.97■■■□□ 2.23
COL13A1-213ENST00000520267 VPS16Q9H269 839 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 L2HGDHQ9H9P8 463 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 DNAI1Q9UI46 699 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 SLX4Q8IY92 1834 aa28.97■■■□□ 2.23
COL13A1-213ENST00000520267 KCNJ18B7U540 433 aa28.96■■■□□ 2.23
COL13A1-213ENST00000520267 COPB1P53618 953 aaKnown RBP28.96■■■□□ 2.23
COL13A1-213ENST00000520267 ORC2Q13416 577 aaPredicted RBP28.96■■■□□ 2.23
COL13A1-213ENST00000520267 KCNJ12Q14500 433 aa28.96■■■□□ 2.23
COL13A1-213ENST00000520267 ZNF219Q9P2Y4 722 aaPredicted RBP28.96■■■□□ 2.23
COL13A1-213ENST00000520267 SLC16A2P36021 539 aa28.96■■■□□ 2.23
COL13A1-213ENST00000520267 PMS1P54277 932 aaKnown RBP28.96■■■□□ 2.23
COL13A1-213ENST00000520267 SPAG1Q07617 926 aa28.96■■■□□ 2.23
COL13A1-213ENST00000520267 MTMR9Q96QG7 549 aa28.96■■■□□ 2.23
COL13A1-213ENST00000520267 EHD4Q9H223 541 aa28.96■■■□□ 2.23
COL13A1-213ENST00000520267 TAB2Q9NYJ8 693 aa28.96■■■□□ 2.23
COL13A1-213ENST00000520267 N4BP3O15049 544 aa28.95■■■□□ 2.23
COL13A1-213ENST00000520267 SLU7O95391 586 aaKnown RBP28.95■■■□□ 2.23
COL13A1-213ENST00000520267 TXKP42681 527 aa28.95■■■□□ 2.23
COL13A1-213ENST00000520267 TCP10Q12799 353 aa28.95■■■□□ 2.23
COL13A1-213ENST00000520267 MAGEF1Q9HAY2 307 aa28.95■■■□□ 2.23
COL13A1-213ENST00000520267 PHLPP2Q6ZVD8 1323 aa28.95■■■□□ 2.22
COL13A1-213ENST00000520267 FAM196BA6NMK8 535 aa28.95■■■□□ 2.22
COL13A1-213ENST00000520267 MTF1Q14872 753 aa28.95■■■□□ 2.22
COL13A1-213ENST00000520267 CCDC96Q2M329 555 aa28.95■■■□□ 2.22
COL13A1-213ENST00000520267 KCTD1Q719H9 257 aa28.95■■■□□ 2.22
COL13A1-213ENST00000520267 CREBRFQ8IUR6 639 aa28.95■■■□□ 2.22
COL13A1-213ENST00000520267 GIMAP8Q8ND71 665 aaPredicted RBP28.95■■■□□ 2.22
COL13A1-213ENST00000520267 ZNF646O15015 1829 aaPredicted RBP28.95■■■□□ 2.22
COL13A1-213ENST00000520267 FANCGO15287 622 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 SLC37A4O43826 429 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 TDP2O95551 362 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 CCDC93Q567U6 631 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 DACT2Q5SW24 774 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 ERO1AQ96HE7 468 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 ITIH6Q6UXX5 1313 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 H7C1D1 291 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 CALCRLQ16602 461 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 SHROOM1Q2M3G4 852 aaPredicted RBP28.94■■■□□ 2.22
COL13A1-213ENST00000520267 STRIP1Q5VSL9 837 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 IRF2BP1Q8IU81 584 aa28.94■■■□□ 2.22
COL13A1-213ENST00000520267 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.94■■■□□ 2.22
COL13A1-213ENST00000520267 V9GYY5 206 aaPredicted RBP28.94■■■□□ 2.22
COL13A1-213ENST00000520267 DDTLA6NHG4 134 aaPredicted RBP28.93■■■□□ 2.22
COL13A1-213ENST00000520267 SOWAHDA6NJG2 315 aa28.93■■■□□ 2.22
COL13A1-213ENST00000520267 ECE2O60344 883 aa28.93■■■□□ 2.22
COL13A1-213ENST00000520267 MFAP3LO75121 409 aa28.93■■■□□ 2.22
COL13A1-213ENST00000520267 GYPCP04921 128 aa28.93■■■□□ 2.22
COL13A1-213ENST00000520267 CASP14P31944 242 aa28.93■■■□□ 2.22
COL13A1-213ENST00000520267 UBE2SQ16763 222 aa28.93■■■□□ 2.22
COL13A1-213ENST00000520267 DESI2Q9BSY9 194 aa28.93■■■□□ 2.22
COL13A1-213ENST00000520267 TRIM9Q9C026 710 aa28.93■■■□□ 2.22
COL13A1-213ENST00000520267 RIC8AQ9NPQ8 531 aa28.93■■■□□ 2.22
COL13A1-213ENST00000520267 USP17L10C9JJH3 530 aa28.92■■■□□ 2.22
COL13A1-213ENST00000520267 H0YIN7 160 aa28.92■■■□□ 2.22
COL13A1-213ENST00000520267 RBM5P52756 815 aaKnown RBP eCLIP28.92■■■□□ 2.22
COL13A1-213ENST00000520267 GPATCH4Q5T3I0 446 aaKnown RBP28.92■■■□□ 2.22
COL13A1-213ENST00000520267 PPP1R18Q6NYC8 613 aa28.92■■■□□ 2.22
COL13A1-213ENST00000520267 CCDC17Q96LX7 622 aa28.92■■■□□ 2.22
COL13A1-213ENST00000520267 FAM198AQ9UFP1 575 aa28.92■■■□□ 2.22
COL13A1-213ENST00000520267 FXR1P51114 621 aaKnown RBP eCLIP28.92■■■□□ 2.22
COL13A1-213ENST00000520267 STYK1Q6J9G0 422 aa28.92■■■□□ 2.22
COL13A1-213ENST00000520267 C7orf25Q9BPX7 421 aa28.92■■■□□ 2.22
COL13A1-213ENST00000520267 MRIQ9BWK5 157 aa28.92■■■□□ 2.22
COL13A1-213ENST00000520267 ANKRD20A12PQ8NF67 263 aa28.91■■■□□ 2.22
COL13A1-213ENST00000520267 TNNI2P48788 182 aa28.91■■■□□ 2.22
COL13A1-213ENST00000520267 CLK2P49760 499 aaKnown RBP28.91■■■□□ 2.22
COL13A1-213ENST00000520267 SEMA3FQ13275 785 aa28.91■■■□□ 2.22
COL13A1-213ENST00000520267 SH3BP5LQ7L8J4 393 aa28.91■■■□□ 2.22
COL13A1-213ENST00000520267 FKBP1AP62942 108 aaKnown RBP28.9■■■□□ 2.22
COL13A1-213ENST00000520267 GRB10Q13322 594 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 STIM1Q13586 685 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 PPP4R3BQ5MIZ7 849 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 RAD9BQ6WBX8 426 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 MTMR8Q96EF0 704 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 CALML4Q96GE6 196 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 CCDC94Q9BW85 323 aaPredicted RBP28.9■■■□□ 2.22
COL13A1-213ENST00000520267 ZBTB5O15062 677 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 CHRNA5P30532 468 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 FXR2P51116 673 aaKnown RBP eCLIP28.9■■■□□ 2.22
COL13A1-213ENST00000520267 NAA15Q9BXJ9 866 aaKnown RBP28.9■■■□□ 2.22
COL13A1-213ENST00000520267 IDI2Q9BXS1 227 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 DHX36Q9H2U1 1008 aaKnown RBP28.9■■■□□ 2.22
COL13A1-213ENST00000520267 LRWD1Q9UFC0 647 aa28.9■■■□□ 2.22
COL13A1-213ENST00000520267 GOLGA6L9A6NEM1 432 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms