RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 FOXP1Q9H334 677 aaPredicted RBP19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 ZSCAN16Q9H4T2 348 aaPredicted RBP19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 PSTPIP2Q9H939 334 aa19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 TXNRD2Q9NNW7 524 aa19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 ZBED4O75132 1171 aa19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 CNMDO75829 334 aa19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 ZBTB48P10074 688 aaPredicted RBP19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 CETPP11597 493 aa19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 ALAS1P13196 640 aa19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 HOXA13P31271 388 aaPredicted RBP19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 CYP4F22Q6NT55 531 aa19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 RIC8AQ9NPQ8 531 aa19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 HOXC10Q9NYD6 342 aa19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 ZNF214Q9UL59 606 aaPredicted RBP19.52■□□□□ 0.72
TSNARE1-205ENST00000520166 PDHXO00330 501 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 NFIBO00712 420 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 MEIS2O14770 477 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 NCLP19338 710 aaKnown RBP19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 ADCY7P51828 1080 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 HERVK_113P62684 666 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 IRX3P78415 501 aaPredicted RBP19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 FSTL1Q12841 308 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 MYSM1Q5VVJ2 828 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 CCDC148Q8NFR7 591 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 CLEC4DQ8WXI8 215 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 USP28Q96RU2 1077 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 C6orf50Q9HD87 102 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 CLIC4Q9Y696 253 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 PCNTO95613 3336 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 EDIL3O43854 480 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 SLC10A3P09131 477 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 PDIA4P13667 645 aaKnown RBP19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 PRKCSHP14314 528 aaPredicted RBP19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 PLS1Q14651 629 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 Q3C1V9 767 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 TPRNQ4KMQ1 711 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 DAGLBQ8NCG7 672 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 RGS22Q8NE09 1264 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 PAGR1Q9BTK6 254 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 RBPJLQ9UBG7 517 aa19.51■□□□□ 0.71
TSNARE1-205ENST00000520166 ESYT2A0FGR8 921 aa19.5■□□□□ 0.71
TSNARE1-205ENST00000520166 hCG_1984214I3L0E3 225 aa19.5■□□□□ 0.71
TSNARE1-205ENST00000520166 IGF2BP3O00425 579 aaKnown RBP eCLIP19.5■□□□□ 0.71
TSNARE1-205ENST00000520166 CALML3P27482 149 aa19.5■□□□□ 0.71
TSNARE1-205ENST00000520166 SNRNP48Q6IEG0 339 aaKnown RBP19.5■□□□□ 0.71
TSNARE1-205ENST00000520166 LBX2Q6XYB7 198 aa19.5■□□□□ 0.71
TSNARE1-205ENST00000520166 CLEC17AQ6ZS10 378 aa19.5■□□□□ 0.71
TSNARE1-205ENST00000520166 ZNF713Q8N859 430 aaPredicted RBP19.5■□□□□ 0.71
TSNARE1-205ENST00000520166 FIBPO43427 364 aa19.49■□□□□ 0.71
TSNARE1-205ENST00000520166 CLK2P49760 499 aaKnown RBP19.49■□□□□ 0.71
TSNARE1-205ENST00000520166 NFKBIBQ15653 356 aa19.49■□□□□ 0.71
TSNARE1-205ENST00000520166 PAXIP1Q6ZW49 1069 aaPredicted RBP19.49■□□□□ 0.71
TSNARE1-205ENST00000520166 BRAPQ7Z569 592 aa19.49■□□□□ 0.71
TSNARE1-205ENST00000520166 CCDC12Q8WUD4 166 aaPredicted RBP19.49■□□□□ 0.71
TSNARE1-205ENST00000520166 PURBQ96QR8 312 aaKnown RBP19.49■□□□□ 0.71
TSNARE1-205ENST00000520166 CTDP1Q9Y5B0 961 aaPredicted RBP19.49■□□□□ 0.71
TSNARE1-205ENST00000520166 CFBP00751 764 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 GNA11P29992 359 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 INF2Q27J81 1249 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 PPP1R18Q6NYC8 613 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 CUL5Q93034 780 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 TRERF1Q96PN7 1200 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 PCDHB6Q9Y5E3 794 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 MRVI1Q9Y6F6 885 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 STAT3P40763 770 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 REXO1Q8N1G1 1221 aaKnown RBP19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 BRMS1Q9HCU9 246 aa19.48■□□□□ 0.71
TSNARE1-205ENST00000520166 TESPA1A2RU30 521 aaPredicted RBP19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 AOC2O75106 756 aa19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 OSBPP22059 807 aa19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 MCM4P33991 863 aa19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 GALNT17Q6IS24 598 aa19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 ANKRD23Q86SG2 305 aa19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 FCHSD1Q86WN1 690 aa19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 COL20A1Q9P218 1284 aa19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 MRPL11Q9Y3B7 192 aaKnown RBP19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 ABCB11O95342 1321 aa19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 MYPNQ86TC9 1320 aa19.47■□□□□ 0.71
TSNARE1-205ENST00000520166 MRPL12P52815 198 aaKnown RBP19.46■□□□□ 0.71
TSNARE1-205ENST00000520166 ZNF174Q15697 407 aa19.46■□□□□ 0.71
TSNARE1-205ENST00000520166 RNF146Q9NTX7 359 aa19.46■□□□□ 0.71
TSNARE1-205ENST00000520166 MYH15Q9Y2K3 1946 aa19.46■□□□□ 0.71
TSNARE1-205ENST00000520166 GADD45BO75293 160 aaPredicted RBP19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 PRPF40AO75400 957 aaKnown RBP19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 APLP1P51693 650 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 SF3A1Q15459 793 aaKnown RBP19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 TBCKQ8TEA7 893 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 ZFP91Q96JP5 570 aaPredicted RBP19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 ATP6V1DQ9Y5K8 247 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 CCDC194A0A1B0GVG4 234 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 ATP2A1O14983 1001 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 UBXN2AP68543 259 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 SLC30A10Q6XR72 485 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 ANKRD13CQ8N6S4 541 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 LEO1Q8WVC0 666 aaPredicted RBP19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 MOV10L1Q9BXT6 1211 aaKnown RBP19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 TEX13BQ9BXU2 312 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 SPATC1LQ9H0A9 340 aa19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 DDX49Q9Y6V7 483 aaKnown RBP19.45■□□□□ 0.7
TSNARE1-205ENST00000520166 ECM2O94769 699 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms