RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 FILIP1LQ4L180 1135 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 RBM26Q5T8P6 1007 aaKnown RBP9.5□□□□□ -0.89
HMGB4-203ENST00000519684 TATDN1Q6P1N9 297 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 SH3BP5LQ7L8J4 393 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 SMYD4Q8IYR2 804 aaPredicted RBP9.5□□□□□ -0.89
HMGB4-203ENST00000519684 MYRIPQ8NFW9 859 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 MKL1Q969V6 931 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 CALML4Q96GE6 196 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 CTAGE1Q96RT6 745 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 SAMSN1Q9NSI8 373 aaKnown RBP9.5□□□□□ -0.89
HMGB4-203ENST00000519684 TMEM232C9JQI7 657 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 DYNC1I1O14576 645 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 CCP110O43303 1012 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 TECP42680 631 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 KCNJ6P48051 423 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 PAK1Q13153 545 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 STIM1Q13586 685 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 SEPT2Q15019 361 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 POTEDQ86YR6 584 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 ANKRD20A12PQ8NF67 263 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 NAP1L4Q99733 375 aaKnown RBP9.5□□□□□ -0.89
HMGB4-203ENST00000519684 RWDD2AQ9UIY3 292 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 YDJCA8MPS7 323 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 GDF11O95390 407 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 SLURP2P0DP57 97 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 PLCG1P19174 1290 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 TXKP42681 527 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 AMPD3Q01432 767 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 KCNB1Q14721 858 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 PTPN14Q15678 1187 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 SPECC1LQ69YQ0 1117 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 RSBN1LQ6PCB5 846 aaPredicted RBP9.49□□□□□ -0.89
HMGB4-203ENST00000519684 CCAR2Q8N163 923 aaKnown RBP9.49□□□□□ -0.89
HMGB4-203ENST00000519684 NELFBQ8WX92 580 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 MTMR8Q96EF0 704 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 CDK5RAP3Q96JB5 506 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 PSMD1Q99460 953 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 PLIN2Q99541 437 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 MTRQ99707 1265 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 PSTPIP2Q9H939 334 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 KCND1Q9NSA2 647 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 RGS17Q9UGC6 210 aaPredicted RBP9.49□□□□□ -0.89
HMGB4-203ENST00000519684 MARCH6O60337 910 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 PPP1R11O60927 126 aaPredicted RBP9.49□□□□□ -0.89
HMGB4-203ENST00000519684 SPAG1Q07617 926 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 IKQ13123 557 aaPredicted RBP9.49□□□□□ -0.89
HMGB4-203ENST00000519684 DLGAP5Q15398 846 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 UBE2SQ16763 222 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 NAALADL2Q58DX5 795 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 CDKAL1Q5VV42 579 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 CEP135Q66GS9 1140 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 GMCL1P1Q8NEA9 526 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 PRMT6Q96LA8 375 aaPredicted RBP9.49□□□□□ -0.89
HMGB4-203ENST00000519684 MED15Q96RN5 788 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 CSRNP1Q96S65 589 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 GTPBP4Q9BZE4 634 aaKnown RBP9.49□□□□□ -0.89
HMGB4-203ENST00000519684 INTS13Q9NVM9 706 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 KBTBD4Q9NVX7 518 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 PAXBP1Q9Y5B6 917 aa9.49□□□□□ -0.89
HMGB4-203ENST00000519684 A0A1B0GTH6 734 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 KIF2AO00139 706 aaPredicted RBP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 GCFC2P16383 781 aaKnown RBP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 FXR2P51116 673 aaKnown RBP eCLIP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 CDC37Q16543 378 aaPredicted RBP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 QRICH1Q2TAL8 776 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 TRMT1Q9NXH9 659 aaKnown RBP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 LRWD1Q9UFC0 647 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 HERC5Q9UII4 1024 aaKnown RBP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 TCP10L2B9ZVM9 353 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 RAD17O75943 681 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 TDP2O95551 362 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 GH2P01242 217 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 CLK2P49760 499 aaKnown RBP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 NR1I3Q14994 352 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 KMT5BQ4FZB7 885 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 MCTP2Q6DN12 878 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 PPP4R3AQ6IN85 833 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 IGSF22Q8N9C0 903 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 SLC16A10Q8TF71 515 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 GMCL1Q96IK5 515 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 MTMR9Q96QG7 549 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 VPS33BQ9H267 617 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 EXOC1Q9NV70 894 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 STK17AQ9UEE5 414 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 DDX25Q9UHL0 483 aaKnown RBP9.48□□□□□ -0.89
HMGB4-203ENST00000519684 PCDHA1Q9Y5I3 950 aa9.48□□□□□ -0.89
HMGB4-203ENST00000519684 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
HMGB4-203ENST00000519684 USP27XA6NNY8 438 aa9.47□□□□□ -0.89
HMGB4-203ENST00000519684 F5H6K3 240 aa9.47□□□□□ -0.89
HMGB4-203ENST00000519684 PSMD14O00487 310 aa9.47□□□□□ -0.89
HMGB4-203ENST00000519684 PSMA7O14818 248 aa9.47□□□□□ -0.89
HMGB4-203ENST00000519684 SLC37A4O43826 429 aa9.47□□□□□ -0.89
HMGB4-203ENST00000519684 RHOBTB3O94955 611 aa9.47□□□□□ -0.89
HMGB4-203ENST00000519684 TPM1P09493 284 aa9.47□□□□□ -0.89
HMGB4-203ENST00000519684 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms