RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 TMEM132BQ14DG7 1078 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 USH1GQ495M9 461 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 TEX2Q8IWB9 1127 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
SDC2-203ENST00000519587 GPRC5AQ8NFJ5 357 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.2
SDC2-203ENST00000519587 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 GLT8D2Q9H1C3 349 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
SDC2-203ENST00000519587 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 SAGE1Q9NXZ1 904 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 BARHL2Q9NY43 387 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 MORF4L1Q9UBU8 362 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 FBXO40Q9UH90 709 aa16.29■□□□□ 0.2
SDC2-203ENST00000519587 ZNF214Q9UL59 606 aaPredicted RBP16.29■□□□□ 0.2
SDC2-203ENST00000519587 MRPL11Q9Y3B7 192 aaKnown RBP16.29■□□□□ 0.2
SDC2-203ENST00000519587 ZNF536O15090 1300 aa16.28■□□□□ 0.2
SDC2-203ENST00000519587 ALAS1P13196 640 aa16.28■□□□□ 0.2
SDC2-203ENST00000519587 PDIA4P13667 645 aaKnown RBP16.28■□□□□ 0.2
SDC2-203ENST00000519587 PKN1Q16512 942 aa16.28■□□□□ 0.2
SDC2-203ENST00000519587 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
SDC2-203ENST00000519587 ANKRD13CQ8N6S4 541 aa16.28■□□□□ 0.2
SDC2-203ENST00000519587 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
SDC2-203ENST00000519587 CFHR5Q9BXR6 569 aa16.28■□□□□ 0.2
SDC2-203ENST00000519587 BTBD7Q9P203 1132 aa16.28■□□□□ 0.2
SDC2-203ENST00000519587 ESYT2A0FGR8 921 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 STXBP3O00186 592 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 PPP1R11O60927 126 aaPredicted RBP16.27■□□□□ 0.2
SDC2-203ENST00000519587 FDPSP14324 419 aaKnown RBP16.27■□□□□ 0.2
SDC2-203ENST00000519587 CALML3P27482 149 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 GALNT17Q6IS24 598 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 MCF2L2Q86YR7 1114 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 RGS22Q8NE09 1264 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 SHCBP1Q8NEM2 672 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 CHST13Q8NET6 341 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 AGBL1Q96MI9 1066 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 IPO9Q96P70 1041 aaKnown RBP16.27■□□□□ 0.2
SDC2-203ENST00000519587 MAF1Q9H063 256 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 MROH8Q9H579 483 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 ACAD9Q9H845 621 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 BRMS1Q9HCU9 246 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 RNF146Q9NTX7 359 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 RBPJLQ9UBG7 517 aa16.27■□□□□ 0.2
SDC2-203ENST00000519587 PLXNB2O15031 1838 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 H3BQV1 296 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 CNMDO75829 334 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 GNA11P29992 359 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 ADCY7P51828 1080 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 SAFBQ15424 915 aaKnown RBP eCLIP16.26■□□□□ 0.19
SDC2-203ENST00000519587 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 COA7Q96BR5 231 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 C6orf50Q9HD87 102 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 TXNRD2Q9NNW7 524 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 HOMER2Q9NSB8 354 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 RNF186Q9NXI6 227 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 VPS54Q9P1Q0 977 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 CPA4Q9UI42 421 aa16.26■□□□□ 0.19
SDC2-203ENST00000519587 TRPA1O75762 1119 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 BCRP11274 1271 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 MAPK4P31152 587 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 NLRP5P59047 1200 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 LARP1BQ659C4 914 aaKnown RBP16.25■□□□□ 0.19
SDC2-203ENST00000519587 NCAPG2Q86XI2 1143 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 CUL5Q93034 780 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 AIFM3Q96NN9 605 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 TRERF1Q96PN7 1200 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
SDC2-203ENST00000519587 IVNS1ABPQ9Y6Y0 642 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 MGAMO43451 1857 aa16.25■□□□□ 0.19
SDC2-203ENST00000519587 SMCHD1A6NHR9 2005 aa16.24■□□□□ 0.19
SDC2-203ENST00000519587 ZNF236Q9UL36 1845 aa16.24■□□□□ 0.19
SDC2-203ENST00000519587 PFASO15067 1338 aa16.24■□□□□ 0.19
SDC2-203ENST00000519587 MRPL12P52815 198 aaKnown RBP16.24■□□□□ 0.19
SDC2-203ENST00000519587 FOSBP53539 338 aa16.24■□□□□ 0.19
SDC2-203ENST00000519587 WDR78Q5VTH9 848 aa16.24■□□□□ 0.19
SDC2-203ENST00000519587 MCTP2Q6DN12 878 aa16.24■□□□□ 0.19
SDC2-203ENST00000519587 C17orf99Q6UX52 265 aa16.24■□□□□ 0.19
SDC2-203ENST00000519587 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
SDC2-203ENST00000519587 SMCO2A6NFE2 343 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 DTNBO60941 627 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 ERCC3P19447 782 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 GNL2Q13823 731 aaKnown RBP16.23■□□□□ 0.19
SDC2-203ENST00000519587 KIF22Q14807 665 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 KRT40Q6A162 431 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 POTEEQ6S8J3 1075 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.23■□□□□ 0.19
SDC2-203ENST00000519587 FBXO18Q8NFZ0 1043 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 PHF20Q9BVI0 1012 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 ZMYND12Q9H0C1 365 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 RIC8AQ9NPQ8 531 aa16.23■□□□□ 0.19
SDC2-203ENST00000519587 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
SDC2-203ENST00000519587 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
SDC2-203ENST00000519587 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
SDC2-203ENST00000519587 MMP1P03956 469 aa16.22■□□□□ 0.19
SDC2-203ENST00000519587 POLR2MP0CAP2 368 aa16.22■□□□□ 0.19
SDC2-203ENST00000519587 KRT2P35908 639 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms