RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TMEM145Q8NBT3 493 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 IER2Q9BTL4 223 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 GPRC5CQ9NQ84 441 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 TNFRSF10DQ9UBN6 386 aa9.29□□□□□ -0.92
PTPN12-213ENST00000519553 TRAV20A0A0B4J274 112 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 FAM153BP0C7A2 387 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 FGFR1P11362 822 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 SEPHS1P49903 392 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 NR0B2Q15466 257 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 TIGD5Q53EQ6 642 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 FOXB2Q5VYV0 432 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 KSR1Q8IVT5 923 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 NAT16Q8N8M0 369 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 KREMEN2Q8NCW0 462 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 NPLOC4Q8TAT6 608 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 FRS2Q8WU20 508 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 OSBP2Q969R2 916 aa9.28□□□□□ -0.92
PTPN12-213ENST00000519553 FITM1A5D6W6 292 aa9.27□□□□□ -0.93
PTPN12-213ENST00000519553 DLX3O60479 287 aa9.27□□□□□ -0.93
PTPN12-213ENST00000519553 CHRNEQ04844 493 aa9.27□□□□□ -0.93
PTPN12-213ENST00000519553 C2orf27AQ580R0 203 aa9.27□□□□□ -0.93
PTPN12-213ENST00000519553 SLC35F1Q5T1Q4 408 aa9.27□□□□□ -0.93
PTPN12-213ENST00000519553 DENND5AQ6IQ26 1287 aa9.27□□□□□ -0.93
PTPN12-213ENST00000519553 ARNTLO00327 626 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 PABPC1P11940 636 aaKnown RBP9.26□□□□□ -0.93
PTPN12-213ENST00000519553 PLS3P13797 630 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 TRHRP34981 398 aaPredicted RBP9.26□□□□□ -0.93
PTPN12-213ENST00000519553 ECI1P42126 302 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 MAP4K2Q12851 820 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 CEP128Q6ZU80 1094 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 ATG4DQ86TL0 474 aaPredicted RBP9.26□□□□□ -0.93
PTPN12-213ENST00000519553 OXR1Q8N573 874 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 CCDC140Q96MF4 163 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 JMJD8Q96S16 334 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 C19orf44Q9H6X5 657 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 CLEC1BQ9P126 229 aa9.26□□□□□ -0.93
PTPN12-213ENST00000519553 PRODHO43272 600 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 PAPLNO95428 1278 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 CPP00450 1065 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 ITGB5P18084 799 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 LONRF2Q1L5Z9 754 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 HSF5Q4G112 596 aaPredicted RBP9.25□□□□□ -0.93
PTPN12-213ENST00000519553 XP32Q5T750 250 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 FYB2Q5VWT5 728 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 MBLAC2Q68D91 279 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 CCDC103Q8IW40 242 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 THAP3Q8WTV1 239 aaPredicted RBP9.25□□□□□ -0.93
PTPN12-213ENST00000519553 EXOC2Q96KP1 924 aa9.25□□□□□ -0.93
PTPN12-213ENST00000519553 TMEFF2Q9UIK5 374 aaPredicted RBP9.25□□□□□ -0.93
PTPN12-213ENST00000519553 A0A1W2PQ45 241 aaPredicted RBP9.24□□□□□ -0.93
PTPN12-213ENST00000519553 A0A1W2PQY0 241 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 NRDCO43847 1150 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 KCNJ6P48051 423 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 RTP1P59025 263 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 TESK1Q15569 626 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 ACBD5Q5T8D3 534 aaPredicted RBP9.24□□□□□ -0.93
PTPN12-213ENST00000519553 HLA-DQA1Q5Y7H0 255 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 JAZF1Q86VZ6 243 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 SPPL2CQ8IUH8 684 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 SH3TC2Q8TF17 1288 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 KCTD13Q8WZ19 329 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 PLCD4Q9BRC7 762 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 PTCH2Q9Y6C5 1203 aa9.24□□□□□ -0.93
PTPN12-213ENST00000519553 NPHP3-ACAD11A0A0J9YXS1 232 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 PSPNO60542 156 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 TBC1D8O95759 1140 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 RAC2P15153 192 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 PAMP19021 973 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 LAPTM5Q13571 262 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 FAM209AQ5JX71 171 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 NSMFQ6X4W1 530 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 NOP9Q86U38 636 aaKnown RBP9.23□□□□□ -0.93
PTPN12-213ENST00000519553 LILRA2Q8N149 483 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 MYLIPQ8WY64 445 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 SHISA4Q96DD7 197 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 RNPC3Q96LT9 517 aaKnown RBP9.23□□□□□ -0.93
PTPN12-213ENST00000519553 MMP19Q99542 508 aa9.23□□□□□ -0.93
PTPN12-213ENST00000519553 AFMP43652 599 aa9.22□□□□□ -0.93
PTPN12-213ENST00000519553 SQSTM1Q13501 440 aa9.22□□□□□ -0.93
PTPN12-213ENST00000519553 KIR3DS1Q14943 382 aa9.22□□□□□ -0.93
PTPN12-213ENST00000519553 NTRK3Q16288 839 aa9.22□□□□□ -0.93
PTPN12-213ENST00000519553 E4F1Q66K89 784 aaPredicted RBP9.22□□□□□ -0.93
PTPN12-213ENST00000519553 NLRX1Q86UT6 975 aa9.22□□□□□ -0.93
PTPN12-213ENST00000519553 CPNE8Q86YQ8 564 aa9.22□□□□□ -0.93
PTPN12-213ENST00000519553 PPIL6Q8IXY8 311 aa9.22□□□□□ -0.93
PTPN12-213ENST00000519553 KISS1RQ969F8 398 aaPredicted RBP9.22□□□□□ -0.93
PTPN12-213ENST00000519553 TRBV23OR9-2A0A075B6M9 112 aa9.21□□□□□ -0.94
PTPN12-213ENST00000519553 TRBV23-1A0A0A0MS06 115 aa9.21□□□□□ -0.94
PTPN12-213ENST00000519553 IRAK1P51617 712 aa9.21□□□□□ -0.94
PTPN12-213ENST00000519553 INF2Q27J81 1249 aa9.21□□□□□ -0.94
PTPN12-213ENST00000519553 TMEM67Q5HYA8 995 aa9.21□□□□□ -0.94
PTPN12-213ENST00000519553 GIMAP6Q6P9H5 292 aa9.21□□□□□ -0.94
PTPN12-213ENST00000519553 KIRREL1Q96J84 757 aa9.21□□□□□ -0.94
PTPN12-213ENST00000519553 CWC22Q9HCG8 908 aaKnown RBP9.21□□□□□ -0.94
PTPN12-213ENST00000519553 IMPACTQ9P2X3 320 aa9.21□□□□□ -0.94
PTPN12-213ENST00000519553 WTIPA6NIX2 430 aaPredicted RBP9.2□□□□□ -0.94
PTPN12-213ENST00000519553 MEFVO15553 781 aaPredicted RBP9.2□□□□□ -0.94
PTPN12-213ENST00000519553 L1CAMP32004 1257 aa9.2□□□□□ -0.94
PTPN12-213ENST00000519553 GALK1P51570 392 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms