RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ARHGEF6Q15052 776 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 TPRNQ4KMQ1 711 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 SNRNP48Q6IEG0 339 aaKnown RBP10.92□□□□□ -0.66
CLN8-203ENST00000518780 CCDC174Q6PII3 467 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 SAMD1Q6SPF0 538 aaPredicted RBP10.92□□□□□ -0.66
CLN8-203ENST00000518780 CCAR1Q8IX12 1150 aaKnown RBP10.92□□□□□ -0.66
CLN8-203ENST00000518780 ABRAQ8N0Z2 381 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 CPXCR1Q8N123 301 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 ANKRD13CQ8N6S4 541 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 JMYQ8N9B5 988 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 BICD2Q8TD16 824 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 PAGR1Q9BTK6 254 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 RAVER2Q9HCJ3 691 aaKnown RBP10.92□□□□□ -0.66
CLN8-203ENST00000518780 WBP1LQ9NX94 342 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 BTBD7Q9P203 1132 aa10.92□□□□□ -0.66
CLN8-203ENST00000518780 JAK2O60674 1132 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 TRPA1O75762 1119 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 GJB2P29033 226 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 PLS1Q14651 629 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 HEATR3Q7Z4Q2 680 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 HOMEZQ8IX15 550 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 AGBL1Q96MI9 1066 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 TRERF1Q96PN7 1200 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 ALG1Q9BT22 464 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 MOV10L1Q9BXT6 1211 aaKnown RBP10.91□□□□□ -0.66
CLN8-203ENST00000518780 ZMYND12Q9H0C1 365 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 ACAD9Q9H845 621 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 C6orf50Q9HD87 102 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 TXNRD2Q9NNW7 524 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 PTPRFP10586 1907 aa10.91□□□□□ -0.66
CLN8-203ENST00000518780 STXBP3O00186 592 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 PIK3CDO00329 1044 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 PPP1R11O60927 126 aaPredicted RBP10.9□□□□□ -0.66
CLN8-203ENST00000518780 GNRH1P01148 92 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 ALAS1P13196 640 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 ERCC3P19447 782 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 NAPAP54920 295 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 PLCB2Q00722 1185 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 SP3Q02447 781 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 KIF22Q14807 665 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 SAFBQ15424 915 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLN8-203ENST00000518780 Q3C1V9 767 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 WWC2Q6AWC2 1192 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 FBXO18Q8NFZ0 1043 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 PIBF1Q8WXW3 757 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 CUL5Q93034 780 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 DDX11Q96FC9 970 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 C8orf76Q96K31 380 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 PSTPIP2Q9H939 334 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 BRMS1Q9HCU9 246 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 RNF146Q9NTX7 359 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 CPA4Q9UI42 421 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 THSD7BQ9C0I4 1608 aa10.9□□□□□ -0.66
CLN8-203ENST00000518780 PFASO15067 1338 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 LOC102724159A0A0B4J2E5 919 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 hCG_1642624A0A1W2PR95 340 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 SMCO2A6NFE2 343 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 TBC1D8O95759 1140 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 FOSP01100 380 aaPredicted RBP10.89□□□□□ -0.67
CLN8-203ENST00000518780 FCER1AP12319 257 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 NLRP5P59047 1200 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 SNAP25P60880 206 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 KCTD2Q14681 263 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 PWP2Q15269 919 aaKnown RBP10.89□□□□□ -0.67
CLN8-203ENST00000518780 USH1GQ495M9 461 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 LARP1BQ659C4 914 aaKnown RBP10.89□□□□□ -0.67
CLN8-203ENST00000518780 NCAPG2Q86XI2 1143 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 DAGLBQ8NCG7 672 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 COA7Q96BR5 231 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 IPO9Q96P70 1041 aaKnown RBP10.89□□□□□ -0.67
CLN8-203ENST00000518780 PHF20Q9BVI0 1012 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 RIC8AQ9NPQ8 531 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 SLC5A4Q9NY91 659 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
CLN8-203ENST00000518780 SLC15A5A6NIM6 579 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 B4DLN1 442 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 H3BQV1 296 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
CLN8-203ENST00000518780 GPR25O00155 361 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 HOXD10P28358 340 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 HSD17B4P51659 736 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 ADCY7P51828 1080 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 FCGRTP55899 365 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 C1QBPQ07021 282 aaKnown RBP10.88□□□□□ -0.67
CLN8-203ENST00000518780 AP3B2Q13367 1082 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 IFFO2Q5TF58 517 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 PLEKHH3Q7Z736 793 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
CLN8-203ENST00000518780 ERO1AQ96HE7 468 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 VPS54Q9P1Q0 977 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 PCDHA4Q9UN74 947 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 RIPK3Q9Y572 518 aa10.88□□□□□ -0.67
CLN8-203ENST00000518780 FKTNO75072 461 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 PPFIA3O75145 1194 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 MMP1P03956 469 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 PTPREP23469 700 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms