RNA–Protein interactions for RNA: ENST00000518436.5

LINC01339-202, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-202ENST00000518436 SHISA4Q96DD7 197 aa5.6□□□□□ -1.51
LINC01339-202ENST00000518436 CCDC113Q9H0I3 377 aa5.6□□□□□ -1.51
LINC01339-202ENST00000518436 NKX2-4Q9H2Z4 354 aa5.6□□□□□ -1.51
LINC01339-202ENST00000518436 CWC22Q9HCG8 908 aaKnown RBP5.6□□□□□ -1.51
LINC01339-202ENST00000518436 CYP26B1Q9NR63 512 aa5.6□□□□□ -1.51
LINC01339-202ENST00000518436 GPR160Q9UJ42 338 aa5.6□□□□□ -1.51
LINC01339-202ENST00000518436 TAF6LQ9Y6J9 622 aa5.6□□□□□ -1.51
LINC01339-202ENST00000518436 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.59□□□□□ -1.51
LINC01339-202ENST00000518436 PDPK1O15530 556 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 TBX1O43435 398 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 SCRN1Q12765 414 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 RASGRF1Q13972 1273 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 GALNT18Q6P9A2 607 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 NLRX1Q86UT6 975 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 ANKRD13AQ8IZ07 590 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 BTN2A2Q8WVV5 523 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 COPS5Q92905 334 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 ZNF669Q96BR6 464 aaPredicted RBP5.59□□□□□ -1.51
LINC01339-202ENST00000518436 SGSM3Q96HU1 749 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 JMJD8Q96S16 334 aa5.59□□□□□ -1.51
LINC01339-202ENST00000518436 DNAJC2Q99543 621 aaKnown RBP5.59□□□□□ -1.51
LINC01339-202ENST00000518436 TRBV23OR9-2A0A075B6M9 112 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 A0A1W2PQU0 124 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 IQCA1LA6NCM1 817 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 EFEMP2O95967 443 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 HOXC12P31275 282 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 PPP2R2AP63151 447 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 MPZL3Q6UWV2 235 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 LRP10Q7Z4F1 713 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 NOP9Q86U38 636 aaKnown RBP5.58□□□□□ -1.52
LINC01339-202ENST00000518436 JAMLQ86YT9 394 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 PMFBP1Q8TBY8 1022 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 LIN37Q96GY3 246 aaPredicted RBP5.58□□□□□ -1.52
LINC01339-202ENST00000518436 CCDC140Q96MF4 163 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 PLCD4Q9BRC7 762 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 CRTAC1Q9NQ79 661 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 FAM53CQ9NYF3 392 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.58□□□□□ -1.52
LINC01339-202ENST00000518436 YBX2Q9Y2T7 364 aaKnown RBP5.58□□□□□ -1.52
LINC01339-202ENST00000518436 RNF114Q9Y508 228 aa5.58□□□□□ -1.52
LINC01339-202ENST00000518436 CCDC85CA6NKD9 419 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 CAPNS1P04632 268 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 SCG5P05408 212 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 PAMP19021 973 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 CYP4F3Q08477 520 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 RASA3Q14644 834 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 INTS4Q96HW7 963 aaKnown RBP5.57□□□□□ -1.52
LINC01339-202ENST00000518436 SLC6A17Q9H1V8 727 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 GPRC5CQ9NQ84 441 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 IMPACTQ9P2X3 320 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 ACSL6Q9UKU0 697 aa5.57□□□□□ -1.52
LINC01339-202ENST00000518436 NPHP3-ACAD11A0A0J9YXS1 232 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 CPP00450 1065 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 THBDP07204 575 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 SNRPB2P08579 225 aaKnown RBP5.56□□□□□ -1.52
LINC01339-202ENST00000518436 PNLIPP16233 465 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 PRKCAP17252 672 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 L1CAMP32004 1257 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 GALK1P51570 392 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 GFRA1P56159 465 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 HSP90AA2PQ14568 343 aaPredicted RBP5.56□□□□□ -1.52
LINC01339-202ENST00000518436 KIR3DS1Q14943 382 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 MTERF2Q49AM1 385 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 IRF2BP1Q8IU81 584 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 SIRT2Q8IXJ6 389 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 LRRC47Q8N1G4 583 aaKnown RBP5.56□□□□□ -1.52
LINC01339-202ENST00000518436 NUP43Q8NFH3 380 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 NLGN2Q8NFZ4 835 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 NPLOC4Q8TAT6 608 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 FRS2Q8WU20 508 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 MKL1Q969V6 931 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 FMNL2Q96PY5 1086 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 DEPDC7Q96QD5 511 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 CLEC1BQ9P126 229 aa5.56□□□□□ -1.52
LINC01339-202ENST00000518436 A0A1W2PQ27 194 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 A0A1W2PQ64 194 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 A0A1W2PQC6 194 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 A0A1W2PQD8 194 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 LRRC10BA6NIK2 292 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 PLS3P13797 630 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 ECI1P42126 302 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 GRIA2P42262 883 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 CORO7P57737 925 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 CYP4F8P98187 520 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 MVKQ03426 396 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 LAPTM5Q13571 262 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 SPATC1Q76KD6 591 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 CPNE8Q86YQ8 564 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 MMP19Q99542 508 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 AARSD1Q9BTE6 412 aaKnown RBP5.55□□□□□ -1.52
LINC01339-202ENST00000518436 OSBPL2Q9H1P3 480 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 ARHGEF4Q9NR80 690 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 SNTG2Q9NY99 539 aa5.55□□□□□ -1.52
LINC01339-202ENST00000518436 FAM221BA6H8Z2 402 aa5.54□□□□□ -1.52
LINC01339-202ENST00000518436 ANKRD62A6NC57 917 aa5.54□□□□□ -1.52
LINC01339-202ENST00000518436 ARL4AP40617 200 aa5.54□□□□□ -1.52
LINC01339-202ENST00000518436 KCNJ6P48051 423 aa5.54□□□□□ -1.52
LINC01339-202ENST00000518436 RBM10P98175 930 aaKnown RBP5.54□□□□□ -1.52
LINC01339-202ENST00000518436 SSRP1Q08945 709 aaKnown RBP5.54□□□□□ -1.52
LINC01339-202ENST00000518436 IFRD2Q12894 506 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms