RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 ATP8A2Q9NTI2 1148 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 SAGE1Q9NXZ1 904 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 ZHX2Q9Y6X8 837 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 ATRNL1Q5VV63 1379 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 SALL3Q9BXA9 1300 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 C1QTNF9BB2RNN3 333 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 CXCL11O14625 94 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 MYCP01106 439 aaPredicted RBP7.3□□□□□ -1.24
MRPS28-203ENST00000518371 CAP2P40123 477 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 ABL2P42684 1182 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 PHKA2P46019 1235 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 USP4Q13107 963 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 TAS1R3Q7RTX0 852 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 BRI3BPQ8WY22 251 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 OSBP2Q969R2 916 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 STRBPQ96SI9 672 aaKnown RBP7.3□□□□□ -1.24
MRPS28-203ENST00000518371 DCP1AQ9NPI6 582 aaPredicted RBP7.3□□□□□ -1.24
MRPS28-203ENST00000518371 PRDM10Q9NQV6 1147 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 SERPINB13Q9UIV8 391 aa7.3□□□□□ -1.24
MRPS28-203ENST00000518371 ECM29Q5VYK3 1845 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 AK9Q5TCS8 1911 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 TRIM75PA6NK02 468 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 USP17L5A8MUK1 530 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 PATL2C9JE40 543 aaKnown RBP7.29□□□□□ -1.24
MRPS28-203ENST00000518371 USP17L12C9JPN9 530 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 USP17L21D6R901 530 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 IGF2BP3O00425 579 aaKnown RBP eCLIP7.29□□□□□ -1.24
MRPS28-203ENST00000518371 GPAA1O43292 621 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 ASNSP08243 561 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 CYP2D6P10635 497 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 GNAT2P19087 354 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 MX2P20592 715 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 PLCD1P51178 756 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 SPP2Q13103 211 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 CERKLQ49MI3 558 aaPredicted RBP7.29□□□□□ -1.24
MRPS28-203ENST00000518371 COL13A1Q5TAT6 717 aaPredicted RBP7.29□□□□□ -1.24
MRPS28-203ENST00000518371 CCDC84Q86UT8 332 aaPredicted RBP7.29□□□□□ -1.24
MRPS28-203ENST00000518371 METTL16Q86W50 562 aaKnown RBP7.29□□□□□ -1.24
MRPS28-203ENST00000518371 RNF135Q8IUD6 432 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 SEC62Q99442 399 aaKnown RBP7.29□□□□□ -1.24
MRPS28-203ENST00000518371 PTPN18Q99952 460 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 NACAP1Q9BZK3 213 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 EHD4Q9H223 541 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 AS3MTQ9HBK9 375 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 ETNK1Q9HBU6 452 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 CABP5Q9NP86 173 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 DOLKQ9UPQ8 538 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 KCNH4Q9UQ05 1017 aa7.29□□□□□ -1.24
MRPS28-203ENST00000518371 COL2A1P02458 1487 aaPredicted RBP7.29□□□□□ -1.24
MRPS28-203ENST00000518371 GSG1L2A8MUP6 293 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 MINDY4BA8MYZ0 360 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 BTBD19C9JJ37 291 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 M0R2C6 588 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 MPHOSPH10O00566 681 aaKnown RBP7.28□□□□□ -1.24
MRPS28-203ENST00000518371 GH2P01242 217 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 TDO2P48775 406 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 RRP1BQ14684 758 aaKnown RBP7.28□□□□□ -1.24
MRPS28-203ENST00000518371 TAF1CQ15572 869 aaPredicted RBP7.28□□□□□ -1.24
MRPS28-203ENST00000518371 ABCB5Q2M3G0 1257 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 OXLD1Q5BKU9 147 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 C12orf60Q5U649 245 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 TATDN1Q6P1N9 297 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 GIMAP6Q6P9H5 292 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 CTR9Q6PD62 1173 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 GADL1Q6ZQY3 521 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 FASTKD5Q7L8L6 764 aaKnown RBP7.28□□□□□ -1.24
MRPS28-203ENST00000518371 STK11IPQ8N1F8 1099 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 FAM43AQ8N2R8 423 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 ZNF280CQ8ND82 737 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 DYNLL2Q96FJ2 89 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 CCDC136Q96JN2 1154 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 TRERF1Q96PN7 1200 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 ZSCAN10Q96SZ4 725 aaPredicted RBP7.28□□□□□ -1.24
MRPS28-203ENST00000518371 DNAJC18Q9H819 358 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 ZFYVE28Q9HCC9 887 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 HELLSQ9NRZ9 838 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 GINM1Q9NU53 330 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.28□□□□□ -1.24
MRPS28-203ENST00000518371 SWAP70Q9UH65 585 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 AFG3L2Q9Y4W6 797 aa7.28□□□□□ -1.24
MRPS28-203ENST00000518371 CYP2D7A0A087X1C5 515 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 SHISA8B8ZZ34 492 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 HIP1O00291 1037 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 PDHXO00330 501 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 FKTNO75072 461 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 F11P03951 625 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 SDSP20132 328 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 JAG1P78504 1218 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 CRHR2Q13324 411 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 GRIN2CQ14957 1233 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 RAB3GAP1Q15042 981 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 MCMDC2Q4G0Z9 681 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 C4orf17Q53FE4 359 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 CCDC129Q6ZRS4 1044 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 CENPQQ7L2Z9 268 aaPredicted RBP7.27□□□□□ -1.25
MRPS28-203ENST00000518371 ANKRD23Q86SG2 305 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 CD163Q86VB7 1156 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 TICAM2Q86XR7 235 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 IFNL3Q8IZI9 196 aa7.27□□□□□ -1.25
MRPS28-203ENST00000518371 TNS4Q8IZW8 715 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms