RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 FEM1BQ9UK73 627 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 HMMRO75330 724 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 CABYRO75952 493 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 SMPD1P17405 629 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 KCNQ1P51787 676 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 PSMC6P62333 389 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 NOL8Q76FK4 1167 aaKnown RBP13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 GMCL1P1Q8NEA9 526 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 FAM122AQ96E09 287 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 SCLYQ96I15 445 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 ACAD9Q9H845 621 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 PDGFCQ9NRA1 345 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 MTMR4Q9NYA4 1195 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 ZNF536O15090 1300 aa13.56□□□□□ -0.24
CTNNA1-205ENST00000517904 LCTP09848 1927 aa13.55□□□□□ -0.24
CTNNA1-205ENST00000517904 GIMAP6Q6P9H5 292 aa13.55□□□□□ -0.24
CTNNA1-205ENST00000517904 OSBP2Q969R2 916 aa13.55□□□□□ -0.24
CTNNA1-205ENST00000517904 AGBL1Q96MI9 1066 aa13.55□□□□□ -0.24
CTNNA1-205ENST00000517904 RNF146Q9NTX7 359 aa13.55□□□□□ -0.24
CTNNA1-205ENST00000517904 ZBTB40Q9NUA8 1239 aa13.55□□□□□ -0.24
CTNNA1-205ENST00000517904 SYNPO2Q9UMS6 1093 aa13.55□□□□□ -0.24
CTNNA1-205ENST00000517904 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
CTNNA1-205ENST00000517904 SCN5AQ14524 2016 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 ASB14A6NK59 587 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 ZBBXA8MT70 800 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 TMEM232C9JQI7 657 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 RFXAPO00287 272 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 DYNC1LI2O43237 492 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 TTLL1O95922 423 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 BMP3P12645 472 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 ATP2A2P16615 1042 aaKnown RBP13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 TTLL4Q14679 1199 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 SLFN13Q68D06 897 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 TAPT1Q6NXT6 567 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 EEPD1Q7L9B9 569 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 FBXO16Q8IX29 292 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 AP5M1Q9H0R1 490 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 COG6Q9Y2V7 657 aa13.54□□□□□ -0.24
CTNNA1-205ENST00000517904 EPOPA6NHQ4 379 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 ERC2O15083 957 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 CA3P07451 260 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 STAT2P52630 851 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 RPUSD2Q8IZ73 545 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 ZNF444Q8N0Y2 327 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 TRERF1Q96PN7 1200 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 PURBQ96QR8 312 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 C1QTNF1Q9BXJ1 281 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 SEZ6LQ9BYH1 1024 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 ALDH8A1Q9H2A2 487 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 TRMT13Q9NUP7 481 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 MTCH2Q9Y6C9 303 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 PLIN4Q96Q06 1357 aa13.53□□□□□ -0.24
CTNNA1-205ENST00000517904 GPAA1O43292 621 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 SMARCA5O60264 1052 aaPredicted RBP13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 ZEB2O60315 1214 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 FDX1P10109 184 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 CYP2C9P11712 490 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 POU3F3P20264 500 aaPredicted RBP13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 SNAP25P60880 206 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 SKIV2LQ15477 1246 aaKnown RBP13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 MUM1L1Q5H9M0 696 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 KRT40Q6A162 431 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 RASGRP2Q7LDG7 609 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 KBTBD3Q8NAB2 608 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 NEDD1Q8NHV4 660 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 APPBP2Q92624 585 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 CERS4Q9HA82 394 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 DDX19BQ9UMR2 479 aa13.52□□□□□ -0.25
CTNNA1-205ENST00000517904 BRWD1Q9NSI6 2320 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 M0R2C6 588 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 ARHGEF15O94989 841 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 ALAS1P13196 640 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 TDO2P48775 406 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 AAK1Q2M2I8 961 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 TMEM67Q5HYA8 995 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 IQSEC1Q6DN90 963 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 DEFB128Q7Z7B8 93 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 STAG1Q8WVM7 1258 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 LRRCC1Q9C099 1032 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 EPHX3Q9H6B9 360 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 CYP39A1Q9NYL5 469 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 ISY1Q9ULR0 285 aaKnown RBP13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 Q9Y3F1 56 aa13.51□□□□□ -0.25
CTNNA1-205ENST00000517904 WDFY4Q6ZS81 3184 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 TNKSO95271 1327 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 RNF113AO15541 343 aaKnown RBP13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 PFKMP08237 780 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 TSPY3P0CV98 308 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 TSPY8P0CW00 308 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 MCCP23508 829 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 SLC1A4P43007 532 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 IKQ13123 557 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 TKFCQ3LXA3 575 aa13.5□□□□□ -0.25
CTNNA1-205ENST00000517904 TSHZ3Q63HK5 1081 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms