RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
PCM1-203ENST00000517545 GOLGA8KD6RF30 607 aa13.79□□□□□ -0.2
PCM1-203ENST00000517545 SCG2P13521 617 aa13.79□□□□□ -0.2
PCM1-203ENST00000517545 INPP5BP32019 993 aa13.79□□□□□ -0.2
PCM1-203ENST00000517545 DYNLL1P63167 89 aaKnown RBP13.79□□□□□ -0.2
PCM1-203ENST00000517545 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
PCM1-203ENST00000517545 CCDC42Q96M95 316 aa13.79□□□□□ -0.2
PCM1-203ENST00000517545 EPHB6O15197 1021 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 KRT14P02533 472 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 LONP1P36776 959 aaKnown RBP13.78□□□□□ -0.2
PCM1-203ENST00000517545 HAUS3Q68CZ6 603 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 CNOT6LQ96LI5 555 aaKnown RBP13.78□□□□□ -0.2
PCM1-203ENST00000517545 OSBPL9Q96SU4 736 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 TMEM60Q9H2L4 133 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 ANAPC4Q9UJX5 808 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 MAGEB6P1A0A0J9YX57 407 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 MIIPQ5JXC2 388 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 ANKRD40Q6AI12 368 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 IQCA1Q86XH1 822 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 ANKRD13CQ8N6S4 541 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 GIMAP8Q8ND71 665 aaPredicted RBP13.78□□□□□ -0.2
PCM1-203ENST00000517545 PIGBQ92521 554 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 IFIH1Q9BYX4 1025 aaKnown RBP13.78□□□□□ -0.2
PCM1-203ENST00000517545 STARD3NLO95772 234 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 MTIF2P46199 727 aaKnown RBP13.78□□□□□ -0.2
PCM1-203ENST00000517545 TRAPPC10P48553 1259 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 MNAT1P51948 309 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 SPA17Q15506 151 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 GBP6Q6ZN66 633 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 TRIM58Q8NG06 486 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.2
PCM1-203ENST00000517545 ZIM3Q96PE6 472 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 SH2D4AQ9H788 454 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 ARHGAP20Q9P2F6 1191 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 SALL4Q9UJQ4 1053 aa13.78□□□□□ -0.2
PCM1-203ENST00000517545 PAPPAQ13219 1627 aa13.77□□□□□ -0.2
PCM1-203ENST00000517545 NDUFAB1O14561 156 aa13.77□□□□□ -0.2
PCM1-203ENST00000517545 FAM47AQ5JRC9 791 aa13.77□□□□□ -0.2
PCM1-203ENST00000517545 MYCBPQ99417 103 aaPredicted RBP13.77□□□□□ -0.2
PCM1-203ENST00000517545 NOC4LQ9BVI4 516 aaKnown RBP13.77□□□□□ -0.2
PCM1-203ENST00000517545 PCDHA13Q9Y5I0 950 aa13.77□□□□□ -0.2
PCM1-203ENST00000517545 BCORQ6W2J9 1755 aa13.77□□□□□ -0.2
PCM1-203ENST00000517545 DOCK2Q92608 1830 aa13.77□□□□□ -0.2
PCM1-203ENST00000517545 WTIPA6NIX2 430 aaPredicted RBP13.77□□□□□ -0.21
PCM1-203ENST00000517545 ZEB2O60315 1214 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 TACC1O75410 805 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 RHOBTB3O94955 611 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 IL2RBP14784 551 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
PCM1-203ENST00000517545 ARL6IP4Q66PJ3 421 aaKnown RBP13.77□□□□□ -0.21
PCM1-203ENST00000517545 C2CD5Q86YS7 1000 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 HPS3Q969F9 1004 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 RUFY1Q96T51 708 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 NUP58Q9BVL2 599 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 PRDM11Q9NQV5 511 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 STIM2Q9P246 746 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 ZBTB1Q9Y2K1 713 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 ZSCAN5CA6NGD5 496 aaPredicted RBP13.77□□□□□ -0.21
PCM1-203ENST00000517545 MYO1FO00160 1098 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 OPA1O60313 960 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 EPHB4P54760 987 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 STK4Q13043 487 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 KCNB1Q14721 858 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 MS4A14Q96JA4 679 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 RBM12Q9NTZ6 932 aaKnown RBP13.77□□□□□ -0.21
PCM1-203ENST00000517545 CAPN7Q9Y6W3 813 aa13.77□□□□□ -0.21
PCM1-203ENST00000517545 ESYT3A0FGR9 886 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 HSF2BPO75031 334 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 FCER1AP12319 257 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 CEP89Q96ST8 783 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 RIOK1Q9BRS2 568 aaKnown RBP13.76□□□□□ -0.21
PCM1-203ENST00000517545 TSGA10Q9BZW7 698 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 FAM207AQ9NSI2 230 aaPredicted RBP13.76□□□□□ -0.21
PCM1-203ENST00000517545 MYH10P35580 1976 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 FAM153BP0C7A2 387 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 APBA1Q02410 837 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 PFKFB3Q16875 520 aaPredicted RBP13.76□□□□□ -0.21
PCM1-203ENST00000517545 FAM153CQ494X1 144 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 CCDC178Q5BJE1 867 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 CCDC181Q5TID7 509 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 DTHD1Q6ZMT9 781 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 ZNF572Q7Z3I7 529 aaPredicted RBP13.76□□□□□ -0.21
PCM1-203ENST00000517545 RETREG2Q8NC44 543 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 FAM153AQ9UHL3 310 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 USO1O60763 962 aaKnown RBP13.76□□□□□ -0.21
PCM1-203ENST00000517545 DDAH1O94760 285 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 CALM1P0DP23 149 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 CALM2P0DP24 149 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 CALM3P0DP25 149 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 EPB41P11171 864 aaKnown RBP13.76□□□□□ -0.21
PCM1-203ENST00000517545 ERCC3P19447 782 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 EIF4A3P38919 411 aaKnown RBP13.76□□□□□ -0.21
PCM1-203ENST00000517545 KIF11P52732 1056 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 SKOR1P84550 965 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 PPARDQ03181 441 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 NNTQ13423 1086 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 P2RX5Q93086 422 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 SLC4A9Q96Q91 983 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 KBTBD4Q9NVX7 518 aa13.76□□□□□ -0.21
PCM1-203ENST00000517545 ZPR1O75312 459 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms