RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ERCC3P19447 782 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 PLS1Q14651 629 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 NOM1Q5C9Z4 860 aaKnown RBP11.43□□□□□ -0.58
CLN8-202ENST00000517514 HSCBQ8IWL3 235 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 SHCBP1Q8NEM2 672 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 AMNQ9BXJ7 453 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 BARHL2Q9NY43 387 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 PCDHA1Q9Y5I3 950 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 LRRC37A2A6NM11 1700 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 DEXIO95424 95 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 HSPA8P11142 646 aaKnown RBP11.42□□□□□ -0.58
CLN8-202ENST00000517514 ALAS1P13196 640 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 SLC4A3P48751 1232 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 LACTBP83111 547 aaPredicted RBP11.42□□□□□ -0.58
CLN8-202ENST00000517514 GHRHRQ02643 423 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 INTS4Q96HW7 963 aaKnown RBP11.42□□□□□ -0.58
CLN8-202ENST00000517514 TRIM47Q96LD4 638 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 FGD4Q96M96 766 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 TRERF1Q96PN7 1200 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 RNF146Q9NTX7 359 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 VPS54Q9P1Q0 977 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 COL20A1Q9P218 1284 aa11.42□□□□□ -0.58
CLN8-202ENST00000517514 MCM3APO60318 1980 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 ABCB11O95342 1321 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 DNAJC25-GNG10A0A024R161 153 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 CDKL5O76039 1030 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
CLN8-202ENST00000517514 SLC25A27O95847 323 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 HSPA1AP0DMV8 641 aaKnown RBP11.41□□□□□ -0.58
CLN8-202ENST00000517514 HSPA1BP0DMV9 641 aaKnown RBP11.41□□□□□ -0.58
CLN8-202ENST00000517514 GJB2P29033 226 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 SP3Q02447 781 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 TKFCQ3LXA3 575 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 MORN1Q5T089 497 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 CPLX2Q6PUV4 134 aaKnown RBP11.41□□□□□ -0.58
CLN8-202ENST00000517514 HEATR3Q7Z4Q2 680 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 GPR142Q7Z601 462 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 NCAPG2Q86XI2 1143 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 TRIM22Q8IYM9 498 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 CD99L2Q8TCZ2 262 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 ZNF296Q8WUU4 475 aaPredicted RBP11.41□□□□□ -0.58
CLN8-202ENST00000517514 USP6NLQ92738 828 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
CLN8-202ENST00000517514 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
CLN8-202ENST00000517514 HOMER2Q9NSB8 354 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 SEC63Q9UGP8 760 aaKnown RBP11.41□□□□□ -0.58
CLN8-202ENST00000517514 GJD2Q9UKL4 321 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 MYH7BA7E2Y1 1941 aa11.41□□□□□ -0.58
CLN8-202ENST00000517514 ASTN1O14525 1302 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 CENPFP49454 3210 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 M0R2N6 131 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 MEIS2O14770 477 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 COBLO75128 1261 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 PTPREP23469 700 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 HSD17B4P51659 736 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 FOSBP53539 338 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 SLC30A10Q6XR72 485 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 RGS22Q8NE09 1264 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 CHST13Q8NET6 341 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 ALG1Q9BT22 464 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 PHF20Q9BVI0 1012 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 MROH8Q9H579 483 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 CYP39A1Q9NYL5 469 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 RBM27Q9P2N5 1060 aaKnown RBP11.4□□□□□ -0.58
CLN8-202ENST00000517514 KCNJ14Q9UNX9 436 aa11.4□□□□□ -0.58
CLN8-202ENST00000517514 CTDP1Q9Y5B0 961 aaPredicted RBP11.4□□□□□ -0.58
CLN8-202ENST00000517514 ESYT2A0FGR8 921 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 hCG_1984214I3L0E3 225 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 EDIL3O43854 480 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 FKTNO75072 461 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 IGHA2P01877 340 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 MAPK4P31152 587 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 PSMC4P43686 418 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 CLK2P49760 499 aaKnown RBP11.39□□□□□ -0.59
CLN8-202ENST00000517514 CCNA1P78396 465 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 HMGN5P82970 282 aaKnown RBP11.39□□□□□ -0.59
CLN8-202ENST00000517514 AKAP17AQ02040 695 aaKnown RBP11.39□□□□□ -0.59
CLN8-202ENST00000517514 GRB14Q14449 540 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 UBE2SQ16763 222 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 PPP1R18Q6NYC8 613 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 USP17L6PQ6QN14 398 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 PLEKHH3Q7Z736 793 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 ZNF713Q8N859 430 aaPredicted RBP11.39□□□□□ -0.59
CLN8-202ENST00000517514 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 ZMYND12Q9H0C1 365 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 ACAD9Q9H845 621 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 SH3GLB2Q9NR46 395 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 GABRQQ9UN88 632 aa11.39□□□□□ -0.59
CLN8-202ENST00000517514 MRPL11Q9Y3B7 192 aaKnown RBP11.39□□□□□ -0.59
CLN8-202ENST00000517514 DDX49Q9Y6V7 483 aaKnown RBP11.39□□□□□ -0.59
CLN8-202ENST00000517514 SOWAHBA6NEL2 793 aa11.38□□□□□ -0.59
CLN8-202ENST00000517514 SMCO2A6NFE2 343 aa11.38□□□□□ -0.59
CLN8-202ENST00000517514 PIK3CDO00329 1044 aa11.38□□□□□ -0.59
CLN8-202ENST00000517514 PGK2P07205 417 aa11.38□□□□□ -0.59
CLN8-202ENST00000517514 HOXA13P31271 388 aaPredicted RBP11.38□□□□□ -0.59
CLN8-202ENST00000517514 COPB2P35606 906 aa11.38□□□□□ -0.59
CLN8-202ENST00000517514 NAPAP54920 295 aa11.38□□□□□ -0.59
CLN8-202ENST00000517514 RPS6P62753 249 aaKnown RBP11.38□□□□□ -0.59
CLN8-202ENST00000517514 GUCY1B3Q02153 619 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms