RNA–Protein interactions for RNA: ENST00000517315.1

NSMCE2-202, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3 BASIC

Gene NSMCE2, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-202ENST00000517315 NPHP1O15259 732 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 PARP10Q53GL7 1025 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 ARTNQ5T4W7 220 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 NXPE4Q6UWF7 544 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 PPP1R42Q7Z4L9 355 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 NLRP10Q86W26 655 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 AMIGO3Q86WK7 504 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 COL23A1Q86Y22 540 aaPredicted RBP7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 ZNF34Q8IZ26 560 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 JARID2Q92833 1246 aaPredicted RBP7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 FAM83CQ9BQN1 747 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 TRMT112Q9UI30 125 aaKnown RBP7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 RNF112Q9ULX5 631 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 USP42Q9H9J4 1324 aaKnown RBP7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 QSER1Q2KHR3 1735 aa7.24□□□□□ -1.25
NSMCE2-202ENST00000517315 MYH3P11055 1940 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 SCN7AQ01118 1682 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 NBPF7P0C2Y1 421 aaPredicted RBP7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 PDIA4P13667 645 aaKnown RBP7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 MAP4P27816 1152 aaKnown RBP7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 SOX4Q06945 474 aaPredicted RBP7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 NFIAQ12857 509 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 AP3B2Q13367 1082 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 LRP8Q14114 963 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 TBC1D9BQ66K14 1250 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 UBE3BQ7Z3V4 1068 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 NLGN1Q8N2Q7 840 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 UTP14AQ9BVJ6 771 aaKnown RBP7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 ZFYVE1Q9HBF4 777 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 LRRFIP2Q9Y608 721 aaKnown RBP7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 PNPLA7Q6ZV29 1317 aa7.23□□□□□ -1.25
NSMCE2-202ENST00000517315 PCCAP05165 728 aaPredicted RBP7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 ADH5P11766 374 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 GYS1P13807 737 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 HSP90B1P14625 803 aaKnown RBP7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 HP1BP3Q5SSJ5 553 aaPredicted RBP7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 SUSD4Q5VX71 490 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 RNF43Q68DV7 783 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 TPTE2Q6XPS3 522 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 NBPF5PQ86XG9 351 aaPredicted RBP7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 RPAP2Q8IXW5 612 aaPredicted RBP7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 ZBTB38Q8NAP3 1195 aaPredicted RBP7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 C2CD4AQ8NCU7 369 aaPredicted RBP7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 FBF1Q8TES7 1133 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 FAM89AQ96GI7 184 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 NYXQ9GZU5 481 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 RWDD1Q9H446 243 aaPredicted RBP7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 ZFP64Q9NPA5 681 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 GPN3Q9UHW5 284 aaPredicted RBP7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 WWC3Q9ULE0 1092 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 UTYO14607 1347 aa7.22□□□□□ -1.25
NSMCE2-202ENST00000517315 IRS4O14654 1257 aaPredicted RBP7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 HMMRO75330 724 aa7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 XRCC5P13010 732 aaKnown RBP7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 ATP8B2P98198 1209 aa7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 NFIXQ14938 502 aa7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 CDPF1Q6NVV7 123 aa7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 SUCLG2Q96I99 432 aa7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 DBNDD2Q9BQY9 259 aa7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 BICC1Q9H694 974 aaKnown RBP7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 RAD18Q9NS91 495 aa7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 UBN2Q6ZU65 1347 aa7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 SH3TC1Q8TE82 1336 aa7.21□□□□□ -1.26
NSMCE2-202ENST00000517315 IBTKQ9P2D0 1353 aaPredicted RBP7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 PDE8AO60658 829 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 SERPINB2P05120 415 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 P4HBP07237 508 aaKnown RBP7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 TM4SF1P30408 202 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 USP11P51784 963 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 ALG1LQ6GMV1 187 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 CEP85Q6P2H3 762 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 ZDHHC13Q8IUH4 622 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 SYNE4Q8N205 404 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 ANKRD44Q8N8A2 993 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 FBLIM1Q8WUP2 373 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 TMEM39AQ9NV64 488 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 AKAP2Q9Y2D5 859 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 ACTL7BQ9Y614 415 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 CDHR2Q9BYE9 1310 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 CARMIL3Q8ND23 1372 aa7.2□□□□□ -1.26
NSMCE2-202ENST00000517315 CASZ1Q86V15 1759 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 SRGAP3O43295 1099 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 HYAL3O43820 417 aaPredicted RBP7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 NTSR2O95665 410 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 TGFB1P01137 390 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 IGHDP01880 384 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 MMP10P09238 476 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 HCLS1P14317 486 aaPredicted RBP7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 CASP7P55210 303 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 ST5P78524 1137 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 FOXO4P98177 505 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 ATP2B2Q01814 1243 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 PPP2R3AQ06190 1150 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 R3HDM1Q15032 1099 aaKnown RBP7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 LMBR1LQ6UX01 489 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 SND1Q7KZF4 910 aaKnown RBP eCLIP7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 CNBD1Q8NA66 436 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 C3orf58Q8NDZ4 430 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 WDR18Q9BV38 432 aa7.19□□□□□ -1.26
NSMCE2-202ENST00000517315 PLA2G12BQ9BX93 195 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms