RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 FAM126BQ8IXS8 530 aa17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 MAFAQ8NHW3 353 aaPredicted RBP17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 AP5M1Q9H0R1 490 aa17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 TTYH1Q9H313 450 aaPredicted RBP17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 TOMM22Q9NS69 142 aa17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 CYP39A1Q9NYL5 469 aa17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 PNMA2Q9UL42 364 aa17.24■□□□□ 0.35
SCARNA20.5-201ENST00000516991 LOC102724159A0A0B4J2E5 919 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 CTAGE5O15320 804 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 ZEB2O60315 1214 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 TOP1P11387 765 aaKnown RBP17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 PCP11498 1178 aaKnown RBP17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 IRX5P78411 483 aaPredicted RBP17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 PWP2Q15269 919 aaKnown RBP17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 MCMDC2Q4G0Z9 681 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 MUM1L1Q5H9M0 696 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 BTNL9Q6UXG8 535 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 TMEM199Q8N511 208 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 CHMP4CQ96CF2 233 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 CRBNQ96SW2 442 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 RANBP17Q9H2T7 1088 aaKnown RBP17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 VTA1Q9NP79 307 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 GNEQ9Y223 722 aaKnown RBP17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 Q9Y3F1 56 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 LCTP09848 1927 aa17.23■□□□□ 0.35
SCARNA20.5-201ENST00000516991 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 FOSL2P15408 326 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 DNAJB2P25686 324 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 AAMPQ13685 434 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 FSCN1Q16658 493 aaKnown RBP17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 SYDE2Q5VT97 1194 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 IQSEC1Q6DN90 963 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 PSRC1Q6PGN9 363 aaPredicted RBP17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 NSMFQ6X4W1 530 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 MYLIPQ8WY64 445 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 INCENPQ9NQS7 918 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 TCP11L1Q9NUJ3 509 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
SCARNA20.5-201ENST00000516991 ASTN1O14525 1302 aa17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 A0A0D9SFI3 127 aa17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 FGAP02671 866 aa17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 MFAP1P55081 439 aaKnown RBP17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 SNAP25P60880 206 aa17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 BEX3Q00994 111 aa17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 RRP12Q5JTH9 1297 aaKnown RBP17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 RASGRP2Q7LDG7 609 aa17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 SLC43A3Q8NBI5 491 aa17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 MORC4Q8TE76 937 aa17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 FAM227BQ96M60 508 aa17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCARNA20.5-201ENST00000516991 UNC80Q8N2C7 3258 aa17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 CD4P01730 458 aa17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 HSPD1P10809 573 aaKnown RBP17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 NT5C2P49902 561 aa17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 CXCL17Q6UXB2 119 aa17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 FBXO16Q8IX29 292 aaPredicted RBP17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 PPP1R12CQ9BZL4 782 aa17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 MTIF3Q9H2K0 278 aaKnown RBP17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 CCDC171Q6TFL3 1326 aa17.2■□□□□ 0.34
SCARNA20.5-201ENST00000516991 DYNC1LI2O43237 492 aaPredicted RBP17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 CSF2RAP15509 400 aa17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 SMPD1P17405 629 aa17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 ITGA7Q13683 1181 aa17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 TMEM240Q5SV17 173 aa17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 TAPT1Q6NXT6 567 aa17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 TIFAQ96CG3 184 aa17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 TTC14Q96N46 770 aa17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 RNF41Q9H4P4 317 aaPredicted RBP17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 LAMA4Q16363 1823 aa17.19■□□□□ 0.34
SCARNA20.5-201ENST00000516991 PDHBP11177 359 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 SLC16A2P36021 539 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 ALDH5A1P51649 535 aaPredicted RBP17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 NMIQ13287 307 aaPredicted RBP17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 BAATQ14032 418 aaPredicted RBP17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 AKNAD1Q5T1N1 836 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 RASIP1Q5U651 963 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 TTBK2Q6IQ55 1244 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 EEPD1Q7L9B9 569 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 ZNF589Q86UQ0 364 aaPredicted RBP17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 MPHOSPH6Q99547 160 aaKnown RBP17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 COL25A1Q9BXS0 654 aaPredicted RBP17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 HIPK3Q9H422 1215 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 IL23AQ9NPF7 189 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 PDGFCQ9NRA1 345 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 FRMPD2Q68DX3 1309 aaPredicted RBP17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 WDR19Q8NEZ3 1342 aa17.18■□□□□ 0.34
SCARNA20.5-201ENST00000516991 TRIM6-TRIM34B2RNG4 842 aa17.17■□□□□ 0.34
SCARNA20.5-201ENST00000516991 NFIBO00712 420 aa17.17■□□□□ 0.34
SCARNA20.5-201ENST00000516991 ZNF543Q08ER8 600 aa17.17■□□□□ 0.34
SCARNA20.5-201ENST00000516991 DUSP28Q4G0W2 176 aa17.17■□□□□ 0.34
SCARNA20.5-201ENST00000516991 MFSD6Q6ZSS7 791 aa17.17■□□□□ 0.34
SCARNA20.5-201ENST00000516991 KIAA1211Q6ZU35 1233 aa17.17■□□□□ 0.34
SCARNA20.5-201ENST00000516991 LNPKQ9C0E8 428 aa17.17■□□□□ 0.34
SCARNA20.5-201ENST00000516991 ZNF576Q9H609 170 aa17.17■□□□□ 0.34
SCARNA20.5-201ENST00000516991 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
SCARNA20.5-201ENST00000516991 POLR3EQ9NVU0 708 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms