RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 THBDP07204 575 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 GP2P55259 537 aaKnown RBP9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 TMEM67Q5HYA8 995 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 FOXB2Q5VYV0 432 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 TMEM145Q8NBT3 493 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 MAP6Q96JE9 813 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 DHRS4Q9BTZ2 278 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 G6PC3Q9BUM1 346 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 KANSL2Q9H9L4 492 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 TNFRSF10DQ9UBN6 386 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 ADAMTS6Q9UKP5 1117 aa9.47□□□□□ -0.89
SNORA48.9-201ENST00000516419 TRBV23OR9-2A0A075B6M9 112 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 TRBV23-1A0A0A0MS06 115 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 TBC1D8O95759 1140 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 PAMP19021 973 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 KIR2DL1P43626 348 aaPredicted RBP9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 KIR2DL2P43627 348 aaPredicted RBP9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 SQSTM1Q13501 440 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 FAM209AQ5JX71 171 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 SLC35F1Q5T1Q4 408 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 KREMEN2Q8NCW0 462 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 NPLOC4Q8TAT6 608 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 EXOC2Q96KP1 924 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 GPRC5CQ9NQ84 441 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 TMEM260Q9NX78 707 aa9.46□□□□□ -0.9
SNORA48.9-201ENST00000516419 RNASE1P07998 156 aaKnown RBP9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 GDNFP39905 211 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 SUMO1P63165 101 aaKnown RBP9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 ZNF792Q3KQV3 632 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 HLA-DQA1Q5Y7H0 255 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 SPPL2CQ8IUH8 684 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 ANKS4BQ8N8V4 417 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 TMEM52Q8NDY8 209 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 PDZD8Q8NEN9 1154 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 FRS2Q8WU20 508 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 KISS1RQ969F8 398 aaPredicted RBP9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 C1orf159Q96HA4 380 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 EBF1Q9UH73 591 aa9.45□□□□□ -0.9
SNORA48.9-201ENST00000516419 ESYT3A0FGR9 886 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 PLS3P13797 630 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 L1CAMP32004 1257 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 HK2P52789 917 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 CHRNEQ04844 493 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 PRSS53Q2L4Q9 553 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 E4F1Q66K89 784 aaPredicted RBP9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 IQCEQ6IPM2 695 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 ABI1Q8IZP0 508 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 OXR1Q8N573 874 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 HHIPL1Q96JK4 782 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 MMP19Q99542 508 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 CLEC1BQ9P126 229 aa9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 MRPS23Q9Y3D9 190 aaKnown RBP9.44□□□□□ -0.9
SNORA48.9-201ENST00000516419 NPHP3-ACAD11A0A0J9YXS1 232 aa9.43□□□□□ -0.9
SNORA48.9-201ENST00000516419 FADS2P1A8MWK0 482 aa9.43□□□□□ -0.9
SNORA48.9-201ENST00000516419 ACBD5Q5T8D3 534 aaPredicted RBP9.43□□□□□ -0.9
SNORA48.9-201ENST00000516419 SDE2Q6IQ49 451 aa9.43□□□□□ -0.9
SNORA48.9-201ENST00000516419 APPBP2Q92624 585 aa9.43□□□□□ -0.9
SNORA48.9-201ENST00000516419 A0A1W2PQ45 241 aaPredicted RBP9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 A0A1W2PQY0 241 aa9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 ENPP3O14638 875 aa9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 MEFVO15553 781 aaPredicted RBP9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 SMARCA5O60264 1052 aaPredicted RBP9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 CEBPAP49715 358 aaPredicted RBP9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 TESK1Q15569 626 aa9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 DENND5AQ6IQ26 1287 aa9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 PPIL6Q8IXY8 311 aa9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 RC3H2Q9HBD1 1191 aaKnown RBP9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 C19orf73Q9NVV2 129 aa9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 FANCLQ9NW38 375 aa9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 CTNND2Q9UQB3 1225 aa9.42□□□□□ -0.9
SNORA48.9-201ENST00000516419 FITM1A5D6W6 292 aa9.41□□□□□ -0.9
SNORA48.9-201ENST00000516419 USP2O75604 605 aaPredicted RBP9.41□□□□□ -0.9
SNORA48.9-201ENST00000516419 HPXP02790 462 aa9.41□□□□□ -0.9
SNORA48.9-201ENST00000516419 NR0B2Q15466 257 aa9.41□□□□□ -0.9
SNORA48.9-201ENST00000516419 SYNPOQ8N3V7 929 aa9.41□□□□□ -0.9
SNORA48.9-201ENST00000516419 SHROOM4Q9ULL8 1493 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 CDC45O75419 566 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 RAC2P15153 192 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 RTP1P59025 263 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 KCNAB2Q13303 367 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 LAPTM5Q13571 262 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 SLC14A2Q15849 920 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 NTRK3Q16288 839 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 CEP128Q6ZU80 1094 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 USP53Q70EK8 1073 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 SLCO6A1Q86UG4 719 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 JAMLQ86YT9 394 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 DIO2Q92813 273 aa9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 OAS3Q9Y6K5 1087 aaKnown RBP9.4□□□□□ -0.9
SNORA48.9-201ENST00000516419 CADPSQ9ULU8 1353 aa9.39□□□□□ -0.91
SNORA48.9-201ENST00000516419 WTIPA6NIX2 430 aaPredicted RBP9.39□□□□□ -0.91
SNORA48.9-201ENST00000516419 LTBRP36941 435 aa9.39□□□□□ -0.91
SNORA48.9-201ENST00000516419 RBM10P98175 930 aaKnown RBP9.39□□□□□ -0.91
SNORA48.9-201ENST00000516419 C16orf86Q6ZW13 317 aa9.39□□□□□ -0.91
SNORA48.9-201ENST00000516419 NBPF11Q86T75 865 aa9.39□□□□□ -0.91
SNORA48.9-201ENST00000516419 CPNE8Q86YQ8 564 aa9.39□□□□□ -0.91
SNORA48.9-201ENST00000516419 LILRA2Q8N149 483 aa9.39□□□□□ -0.91
SNORA48.9-201ENST00000516419 DCAF4Q8WV16 495 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms