RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 TBC1D2BQ9UPU7 963 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ZKSCAN5Q9Y2L8 839 aa0.57□□□□□ -2.32
SCARNA21.1-201ENST00000515996 A0A1W2PNU3 283 aaPredicted RBP0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 GRID2IPA4D2P6 1211 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 FADS2P1A8MWK0 482 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 APBB1O00213 710 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SRGAP3O43295 1099 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ZNF157P51786 506 aaPredicted RBP0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TROAPQ12815 778 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 VPS72Q15906 364 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PRR31Q5SQ13 230 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PRAMEF13Q5VWM6 474 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 HIST2H2BCQ6DN03 193 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ZPBP2Q6X784 338 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 RNF111Q6ZNA4 994 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SLCO6A1Q86UG4 719 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TMPRSS12Q86WS5 348 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ZNF507Q8TCN5 953 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 GPBAR1Q8TDU6 330 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CPA5Q8WXQ8 436 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 NELL1Q92832 810 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 FUBP1Q96AE4 644 aaKnown RBP0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 FAM89AQ96GI7 184 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ACSBG1Q96GR2 724 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SYT3Q9BQG1 590 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 C11orf84Q9BUA3 381 aaPredicted RBP0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 IMPACTQ9P2X3 320 aa0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ZNF777Q9ULD5 760 aaPredicted RBP0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SHISA3A0PJX4 238 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 WDR91A4D1P6 747 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 USP17L3A6NCW0 530 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 USP17L4A6NCW7 530 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 F8W031 263 aaPredicted RBP0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TNFRSF10BO14763 440 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 RBMXL2O75526 392 aaKnown RBP0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PEX11BO96011 259 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CYP2C8P10632 490 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CAP2P40123 477 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ETV3P41162 512 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CACNB2Q08289 660 aaPredicted RBP0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SF3B4Q15427 424 aaKnown RBP eCLIP0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 MAP1SQ66K74 1059 aaPredicted RBP0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 KIAA1161Q6NSJ0 714 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 USP17L2Q6R6M4 530 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 MAMDC4Q6UXC1 1216 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 USP17L1Q7RTZ2 530 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 RBMXL3Q8N7X1 1067 aaKnown RBP0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 KYQ8NBH2 561 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 AK7Q96M32 723 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 LMF1Q96S06 567 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 FOXP3Q9BZS1 431 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SAP130Q9H0E3 1048 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SEC61A2Q9H9S3 476 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 LIN7BQ9HAP6 207 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PARPBPQ9NWS1 579 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TNFRSF10DQ9UBN6 386 aa0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SETD1BQ9UPS6 1966 aaKnown RBP0.55□□□□□ -2.32
SCARNA21.1-201ENST00000515996 MACF1Q9UPN3 7388 aaKnown RBP0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 RBM47A0AV96 593 aaKnown RBP0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ZBTB39O15060 712 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 FKTNO75072 461 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PHACTR2O75167 634 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 RPS6KA4O75676 772 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 RAD17O75943 681 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 C8BP07358 591 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ZNF28P17035 718 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ITPKAP23677 461 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 WEE1P30291 646 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CCKARP32238 428 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SOX11P35716 441 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 KRT2P35908 639 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PTH2RP49190 550 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CCT4P50991 539 aaKnown RBP0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PCOLCEQ15113 449 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 LCE3EQ5T5B0 92 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 HECTD2Q5U5R9 776 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 PRAMEF18Q5VWM3 479 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TECPR1Q7Z6L1 1165 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TAX1BP1Q86VP1 789 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ZNF808Q8N4W9 903 aaPredicted RBP0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 BOLLQ8N9W6 283 aaKnown RBP0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 YTHDC1Q96MU7 727 aaKnown RBP0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 FCRL4Q96PJ5 515 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 LRFN3Q9BTN0 628 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TMEM168Q9H0V1 697 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 TOR3AQ9H497 397 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 NRDE2Q9H7Z3 1164 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 AURKAIP1Q9NWT8 199 aaPredicted RBP0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CRCT1Q9UGL9 99 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 DBR1Q9UK59 544 aaKnown RBP0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 KCNH3Q9ULD8 1083 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 MMP24Q9Y5R2 645 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 AHNAK2Q8IVF2 5795 aa0.54□□□□□ -2.32
SCARNA21.1-201ENST00000515996 IGKV2D-30A0A075B6S6 120 aa0.53□□□□□ -2.32
SCARNA21.1-201ENST00000515996 ERI2A8K979 691 aaKnown RBP0.53□□□□□ -2.32
SCARNA21.1-201ENST00000515996 CST3P01034 146 aaPredicted RBP0.53□□□□□ -2.32
SCARNA21.1-201ENST00000515996 SLC25A3Q00325 362 aa0.53□□□□□ -2.32
SCARNA21.1-201ENST00000515996 POU4F1Q01851 419 aa0.53□□□□□ -2.32
SCARNA21.1-201ENST00000515996 BICRALQ6AI39 1079 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms