RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 USP17L10C9JJH3 530 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 F5H6K3 240 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.352e-6■■□□□ 13.7
SDHA-218ENST00000515752 AMPD3Q01432 767 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.351e-7■■■□□ 17.2
SDHA-218ENST00000515752 KLRC3Q07444 240 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 CUL4BQ13620 913 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 PDIA5Q14554 519 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 CALCRLQ16602 461 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 ZNF658Q5TYW1 1059 aaPredicted RBP17.24■□□□□ 0.35
SDHA-218ENST00000515752 CABP7Q86V35 215 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 IGSF22Q8N9C0 903 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
SDHA-218ENST00000515752 PRIMPOLQ96LW4 560 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 PDGFDQ9GZP0 370 aaPredicted RBP17.24■□□□□ 0.35
SDHA-218ENST00000515752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.24■□□□□ 0.35
SDHA-218ENST00000515752 KBTBD4Q9NVX7 518 aa17.24■□□□□ 0.35
SDHA-218ENST00000515752 ZNF70Q9UC06 446 aaPredicted RBP17.24■□□□□ 0.35
SDHA-218ENST00000515752 PSME4Q14997 1843 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 RAD17O75943 681 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 RPN1P04843 607 aaKnown RBP17.23■□□□□ 0.35
SDHA-218ENST00000515752 SLC16A2P36021 539 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 KCNJ6P48051 423 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 FAM83AQ86UY5 434 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 SIAH1Q8IUQ4 282 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 FBXO41Q8TF61 875 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 CALML4Q96GE6 196 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 MTMR9Q96QG7 549 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 ZNF277Q9NRM2 450 aaPredicted RBP17.23■□□□□ 0.35
SDHA-218ENST00000515752 KCND1Q9NSA2 647 aa17.23■□□□□ 0.35
SDHA-218ENST00000515752 SYNRGQ9UMZ2 1314 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 FAM196BA6NMK8 535 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 PPP1R3GB7ZBB8 358 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 TBC1D12O60347 775 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
SDHA-218ENST00000515752 VSTM4Q8IW00 320 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 CCDC112Q8NEF3 446 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 ARHGEF10LQ9HCE6 1279 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 RWDD2AQ9UIY3 292 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 R3HCC1Q9Y3T6 440 aaKnown RBP17.22■□□□□ 0.35
SDHA-218ENST00000515752 PCDHA1Q9Y5I3 950 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 SIPA1L1O43166 1804 aa17.22■□□□□ 0.35
SDHA-218ENST00000515752 PPP1R11O60927 126 aaPredicted RBP17.21■□□□□ 0.35
SDHA-218ENST00000515752 GH2P01242 217 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 POLD1P28340 1107 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 PPP1R2P41236 205 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 AP3B2Q13367 1082 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 NAALADL2Q58DX5 795 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 BTNL9Q6UXG8 535 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 MTRQ99707 1265 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 AMNQ9BXJ7 453 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 TMEM260Q9NX78 707 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 RAD21O60216 631 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 BMP3P12645 472 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 CDC25AP30304 524 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 USP11P51784 963 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 SPAG1Q07617 926 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 STIM1Q13586 685 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 CDC37Q16543 378 aaPredicted RBP17.21■□□□□ 0.35
SDHA-218ENST00000515752 QRICH1Q2TAL8 776 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
SDHA-218ENST00000515752 MYH4Q9Y623 1939 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 TCP10L2B9ZVM9 353 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 SLC26A4O43511 780 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 GDF11O95390 407 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 NDUFB10O96000 172 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 TECP42680 631 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 TNNI2P48788 182 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 CCZ1BP86790 482 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 CCZ1P86791 482 aaPredicted RBP17.2■□□□□ 0.34
SDHA-218ENST00000515752 TPD52L1Q16890 204 aaPredicted RBP17.2■□□□□ 0.34
SDHA-218ENST00000515752 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
SDHA-218ENST00000515752 MOXD1Q6UVY6 613 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 LRRC27Q9C0I9 530 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 BLZF1Q9H2G9 400 aa17.2■□□□□ 0.34
SDHA-218ENST00000515752 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
SDHA-218ENST00000515752 FOSP01100 380 aaPredicted RBP17.19■□□□□ 0.34
SDHA-218ENST00000515752 PAK1Q13153 545 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 FILIP1LQ4L180 1135 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 SYDE2Q5VT97 1194 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 KLHL10Q6JEL2 608 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 POTEDQ86YR6 584 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 TRMT44Q8IYL2 757 aaKnown RBP17.19■□□□□ 0.34
SDHA-218ENST00000515752 C17orf53Q8N3J3 647 aaPredicted RBP17.19■□□□□ 0.34
SDHA-218ENST00000515752 ANKRD20A12PQ8NF67 263 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 JDP2Q8WYK2 163 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 STAMQ92783 540 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 SH2D4AQ9H788 454 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 GOPCQ9HD26 462 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 LRWD1Q9UFC0 647 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 PP2D1A8MPX8 630 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 RHOBTB3O94955 611 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 CD44P16070 742 aaKnown RBP17.19■□□□□ 0.34
SDHA-218ENST00000515752 PLCG1P19174 1290 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 CASP1P29466 404 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 TXKP42681 527 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 TNIP1Q15025 636 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 CDKAL1Q5VV42 579 aa17.19■□□□□ 0.34
SDHA-218ENST00000515752 MED15Q96RN5 788 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms