RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 VWA3AA6NCI4 1184 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 CCNT1O60563 726 aaKnown RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 KINO60870 393 aaKnown RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 LETM1O95202 739 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 MRPL12P52815 198 aaKnown RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 ATP2C1P98194 919 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 MAP3K11Q16584 847 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 KRT25Q7Z3Z0 450 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 FAM177A1Q8N128 213 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 RNF214Q8ND24 703 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 TBC1D5Q92609 795 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 SDF4Q9BRK5 362 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 KCNH3Q9ULD8 1083 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 OPLAHO14841 1288 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 POTEJP0CG39 1038 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 CDC25AP30304 524 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 SYKP43405 635 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 CLK2P49760 499 aaKnown RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 HMGCS2P54868 508 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 BACE1P56817 501 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 LONRF3Q496Y0 759 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 USP50Q70EL3 339 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 PDILTQ8N807 584 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 ZNF280CQ8ND82 737 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 CNKSR2Q8WXI2 1034 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 P2RX7Q99572 595 aaKnown RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 TANGO6Q9C0B7 1094 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 TSPY26PQ9H489 355 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 TAF1DQ9H5J8 278 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-213ENST00000515418 FEM1BQ9UK73 627 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 HPSEQ9Y251 543 aa10.43□□□□□ -0.74
CPNE4-213ENST00000515418 MYH7BA7E2Y1 1941 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 DOCK1Q14185 1865 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 MEIS2O14770 477 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 VCAM1P19320 739 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
CPNE4-213ENST00000515418 FMR1Q06787 632 aaKnown RBP eCLIP10.42□□□□□ -0.74
CPNE4-213ENST00000515418 PPP1R18Q6NYC8 613 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 NEK8Q86SG6 692 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 AGBL1Q96MI9 1066 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 UIMC1Q96RL1 719 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 FUCA2Q9BTY2 467 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 WDR18Q9BV38 432 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 GINM1Q9NU53 330 aa10.42□□□□□ -0.74
CPNE4-213ENST00000515418 A0A087X0B3 334 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 POLR2DO15514 142 aaKnown RBP10.41□□□□□ -0.74
CPNE4-213ENST00000515418 MRE11P49959 708 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 MAP3K9P80192 1104 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 VGLL4Q14135 290 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 ZNF579Q8NAF0 562 aaKnown RBP10.41□□□□□ -0.74
CPNE4-213ENST00000515418 CDCA5Q96FF9 252 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 RANBP17Q9H2T7 1088 aaKnown RBP10.41□□□□□ -0.74
CPNE4-213ENST00000515418 RPAP3Q9H6T3 665 aaPredicted RBP10.41□□□□□ -0.74
CPNE4-213ENST00000515418 PHIPQ8WWQ0 1821 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 WDR46O15213 610 aaKnown RBP10.41□□□□□ -0.74
CPNE4-213ENST00000515418 PPP1R12BO60237 982 aaPredicted RBP10.41□□□□□ -0.74
CPNE4-213ENST00000515418 FLOT1O75955 427 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 TDP2O95551 362 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 BMP15O95972 392 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 RBM43Q6ZSC3 357 aaKnown RBP10.41□□□□□ -0.74
CPNE4-213ENST00000515418 FAM160B2Q86V87 743 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 LDHDQ86WU2 507 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 CPXCR1Q8N123 301 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 PRPF38AQ8NAV1 312 aaKnown RBP10.41□□□□□ -0.74
CPNE4-213ENST00000515418 LPAR1Q92633 364 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 SYMPKQ92797 1274 aaKnown RBP10.41□□□□□ -0.74
CPNE4-213ENST00000515418 GJA10Q969M2 543 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 FERMT2Q96AC1 680 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 WNK4Q96J92 1243 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 CLMNQ96JQ2 1002 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 SLF1Q9BQI6 1058 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 FAM13BQ9NYF5 915 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 AFG3L2Q9Y4W6 797 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 SNCAIPQ9Y6H5 919 aa10.41□□□□□ -0.74
CPNE4-213ENST00000515418 FAM237AA0A1B0GTK4 181 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 PP2D1A8MPX8 630 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 FOXN1O15353 648 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 SLC37A4O43826 429 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 PLA2G6O60733 806 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 CFBP00751 764 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 TYRO3Q06418 890 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 TTLL12Q14166 644 aaPredicted RBP10.4□□□□□ -0.74
CPNE4-213ENST00000515418 FCHSD1Q86WN1 690 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 ZC3H15Q8WU90 426 aaKnown RBP10.4□□□□□ -0.74
CPNE4-213ENST00000515418 AS3MTQ9HBK9 375 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 SERTAD1Q9UHV2 236 aa10.4□□□□□ -0.74
CPNE4-213ENST00000515418 NEMFO60524 1076 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 CCDC192P0DO97 292 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 USP14P54578 494 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 NOL9Q5SY16 702 aaKnown RBP10.39□□□□□ -0.75
CPNE4-213ENST00000515418 L1TD1Q5T7N2 865 aaKnown RBP10.39□□□□□ -0.75
CPNE4-213ENST00000515418 MAP1SQ66K74 1059 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-213ENST00000515418 ISM2Q6H9L7 571 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 DTHD1Q6ZMT9 781 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 GRAMD1CQ8IYS0 662 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 ELP3Q9H9T3 547 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms