RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 TMX2Q9Y320 296 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 SSC5DA1L4H1 1573 aa11.62□□□□□ -0.55
SNF8-214ENST00000515174 PTPRFP10586 1907 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 SLURP2P0DP57 97 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 SLC1A4P43007 532 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
SNF8-214ENST00000515174 NONOQ15233 471 aaKnown RBP eCLIP11.61□□□□□ -0.55
SNF8-214ENST00000515174 LONRF3Q496Y0 759 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 SARM1Q6SZW1 724 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 TRIML1Q8N9V2 468 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 AK8Q96MA6 479 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 TRPM7Q96QT4 1865 aa11.61□□□□□ -0.55
SNF8-214ENST00000515174 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 FAM196BA6NMK8 535 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 WNT7AO00755 349 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 GH2P01242 217 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 SLFN14P0C7P3 912 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 CAP2P40123 477 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 GRIN1Q05586 938 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 RRP1BQ14684 758 aaKnown RBP11.6□□□□□ -0.55
SNF8-214ENST00000515174 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
SNF8-214ENST00000515174 NOM1Q5C9Z4 860 aaKnown RBP11.6□□□□□ -0.55
SNF8-214ENST00000515174 NEK8Q86SG6 692 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 CEP57L1Q8IYX8 460 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 REXO1Q8N1G1 1221 aaKnown RBP11.6□□□□□ -0.55
SNF8-214ENST00000515174 PIBF1Q8WXW3 757 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 TRIM44Q96DX7 344 aaPredicted RBP11.6□□□□□ -0.55
SNF8-214ENST00000515174 NAP1L4Q99733 375 aaKnown RBP11.6□□□□□ -0.55
SNF8-214ENST00000515174 CCSER1Q9C0I3 900 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 SH2D4AQ9H788 454 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 ARHGEF10LQ9HCE6 1279 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 VAT1LQ9HCJ6 419 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 GPCPD1Q9NPB8 672 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 GGA3Q9NZ52 723 aa11.6□□□□□ -0.55
SNF8-214ENST00000515174 FRMPD2Q68DX3 1309 aaPredicted RBP11.6□□□□□ -0.55
SNF8-214ENST00000515174 H7C1D1 291 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 IKBKBO14920 756 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 ADAMTS3O15072 1205 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 POLR2DO15514 142 aaKnown RBP11.59□□□□□ -0.55
SNF8-214ENST00000515174 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
SNF8-214ENST00000515174 NDUFB10O96000 172 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 ASNSP08243 561 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 BMP3P12645 472 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 ATP2B1P20020 1258 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 ADCY7P51828 1080 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 SOX10P56693 466 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 JAG1P78504 1218 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 NOGQ13253 232 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 CCDC96Q2M329 555 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 PPP4R3AQ6IN85 833 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 TTBK2Q6IQ55 1244 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 DTHD1Q6ZMT9 781 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 RASGRP2Q7LDG7 609 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 HOMER1Q86YM7 354 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 CLEC10AQ8IUN9 316 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 DNAJC25Q9H1X3 360 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 CPVLQ9H3G5 476 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 GOPCQ9HD26 462 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 ZBTB21Q9ULJ3 1066 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 MTMR7Q9Y216 660 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 CASP8AP2Q9UKL3 1982 aa11.59□□□□□ -0.55
SNF8-214ENST00000515174 PARP14Q460N5 1801 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 PDE4DIPQ5VU43 2346 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 A0A1W2PRG0 241 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 SMTNL1A8MU46 457 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 PHF20L1A8MW92 1017 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 USP17L10C9JJH3 530 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 SLC26A4O43511 780 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 PPP1R11O60927 126 aaPredicted RBP11.58□□□□□ -0.56
SNF8-214ENST00000515174 ADCY5O95622 1261 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 MYL1P05976 194 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 GCFC2P16383 781 aaKnown RBP11.58□□□□□ -0.56
SNF8-214ENST00000515174 MCM7P33993 719 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 USP11P51784 963 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 HIRAP54198 1017 aaPredicted RBP11.58□□□□□ -0.56
SNF8-214ENST00000515174 HUNKP57058 714 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 ATP2B2Q01814 1243 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 RASA3Q14644 834 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 POSTNQ15063 836 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 E2F4Q16254 413 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 IL17AQ16552 155 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 INF2Q27J81 1249 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 ANGEL2Q5VTE6 544 aaKnown RBP11.58□□□□□ -0.56
SNF8-214ENST00000515174 MOXD1Q6UVY6 613 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 KCTD1Q719H9 257 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.58□□□□□ -0.56
SNF8-214ENST00000515174 FAM43AQ8N2R8 423 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 IQUBQ8NA54 791 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 CHURC1Q8WUH1 139 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
SNF8-214ENST00000515174 CUL5Q93034 780 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 HOOK2Q96ED9 719 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 HHIPL1Q96JK4 782 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 TEPSINQ96N21 525 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 AMNQ9BXJ7 453 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 TMEM39BQ9GZU3 492 aa11.58□□□□□ -0.56
SNF8-214ENST00000515174 CUEDC2Q9H467 287 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms