RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 SLC4A3P48751 1232 aa14.38□□□□□ -0.11
SMAD5-210ENST00000515005 WDR5P61964 334 aaKnown RBP14.38□□□□□ -0.11
SMAD5-210ENST00000515005 DEFB103AP81534 67 aa14.38□□□□□ -0.11
SMAD5-210ENST00000515005 ICA1Q05084 483 aa14.38□□□□□ -0.11
SMAD5-210ENST00000515005 FBXL6Q8N531 539 aa14.38□□□□□ -0.11
SMAD5-210ENST00000515005 PABPC5Q96DU9 382 aaKnown RBP14.38□□□□□ -0.11
SMAD5-210ENST00000515005 TEX13BQ9BXU2 312 aa14.38□□□□□ -0.11
SMAD5-210ENST00000515005 AP5M1Q9H0R1 490 aa14.38□□□□□ -0.11
SMAD5-210ENST00000515005 MYH8P13535 1937 aa14.37□□□□□ -0.11
SMAD5-210ENST00000515005 NCOR2Q9Y618 2525 aa14.37□□□□□ -0.11
SMAD5-210ENST00000515005 PROB1E7EW31 1015 aa14.37□□□□□ -0.11
SMAD5-210ENST00000515005 SMPD1P17405 629 aa14.37□□□□□ -0.11
SMAD5-210ENST00000515005 VCPP55072 806 aaKnown RBP14.37□□□□□ -0.11
SMAD5-210ENST00000515005 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMAD5-210ENST00000515005 MRPL38Q96DV4 380 aaKnown RBP14.37□□□□□ -0.11
SMAD5-210ENST00000515005 SH2D4AQ9H788 454 aa14.37□□□□□ -0.11
SMAD5-210ENST00000515005 NAV1Q8NEY1 1877 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 AKR1B1P15121 316 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 ZAP70P43403 619 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 COL19A1Q14993 1142 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 TCEAL5Q5H9L2 206 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 TTC39AQ5SRH9 613 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 FAM83BQ5T0W9 1011 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 TMEM63BQ5T3F8 832 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 RETREG2Q8NC44 543 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 FBXO22Q8NEZ5 403 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 RAD9AQ99638 391 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 C17orf80Q9BSJ5 609 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 TRPC6Q9Y210 931 aa14.36□□□□□ -0.11
SMAD5-210ENST00000515005 MED19A0JLT2 244 aaPredicted RBP14.35□□□□□ -0.11
SMAD5-210ENST00000515005 H0Y858 1186 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 SRGAP3O43295 1099 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 GJB5O95377 273 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 CNTN2Q02246 1040 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 SMAD2Q15796 467 aaKnown RBP14.35□□□□□ -0.11
SMAD5-210ENST00000515005 CPXCR1Q8N123 301 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 ANKRD35Q8N283 1001 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 BANK1Q8NDB2 785 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 PPP1R13LQ8WUF5 828 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 POP1Q99575 1024 aaKnown RBP14.35□□□□□ -0.11
SMAD5-210ENST00000515005 IRF2BPLQ9H1B7 796 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 TLR9Q9NR96 1032 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 PDGFCQ9NRA1 345 aa14.35□□□□□ -0.11
SMAD5-210ENST00000515005 DDX49Q9Y6V7 483 aaKnown RBP14.35□□□□□ -0.11
SMAD5-210ENST00000515005 BAHCC1Q9P281 2608 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 PRR23AA6NEV1 266 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 RAD21O60216 631 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 IDH1O75874 414 aaKnown RBP14.34□□□□□ -0.11
SMAD5-210ENST00000515005 CYP2D6P10635 497 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 LTBRP36941 435 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 CLUL1Q15846 466 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 FAM117BQ6P1L5 589 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 CERS3Q8IU89 383 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 SSH1Q8WYL5 1049 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 FSD1Q9BTV5 496 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 CLDND1Q9NY35 253 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 CTNNA3Q9UI47 895 aa14.34□□□□□ -0.11
SMAD5-210ENST00000515005 IGSF3O75054 1194 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
SMAD5-210ENST00000515005 GPNMBQ14956 572 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 PTPROQ16827 1216 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 TIGD5Q53EQ6 642 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 FAM47CQ5HY64 1035 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 DYNLL2Q96FJ2 89 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 NUP88Q99567 741 aaPredicted RBP14.33□□□□□ -0.12
SMAD5-210ENST00000515005 SLF1Q9BQI6 1058 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 DBNDD2Q9BQY9 259 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 MCM9Q9NXL9 1143 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 VPS13AQ96RL7 3174 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 SCN10AQ9Y5Y9 1956 aa14.33□□□□□ -0.12
SMAD5-210ENST00000515005 MBTPS2O43462 519 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 AVPR2P30518 371 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 ZXDAP98168 799 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 DLX2Q07687 328 aaPredicted RBP14.32□□□□□ -0.12
SMAD5-210ENST00000515005 TCTN1Q2MV58 587 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 CCDC158Q5M9N0 1113 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.32□□□□□ -0.12
SMAD5-210ENST00000515005 RPAINQ86UA6 219 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 MEIS3Q99687 375 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 RIOK1Q9BRS2 568 aaKnown RBP14.32□□□□□ -0.12
SMAD5-210ENST00000515005 HDAC5Q9UQL6 1122 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 Q9Y3F1 56 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 WDR87Q6ZQQ6 2873 aa14.32□□□□□ -0.12
SMAD5-210ENST00000515005 DMDP11532 3685 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 STXBP3O00186 592 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 ATP2A1O14983 1001 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 PURAQ00577 322 aaKnown RBP14.31□□□□□ -0.12
SMAD5-210ENST00000515005 BFSP2Q13515 415 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 NBPF20Q3BBV1 942 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 TAPT1Q6NXT6 567 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 EEPD1Q7L9B9 569 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 RAVER2Q9HCJ3 691 aaKnown RBP14.31□□□□□ -0.12
SMAD5-210ENST00000515005 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 ATG2AQ2TAZ0 1938 aa14.31□□□□□ -0.12
SMAD5-210ENST00000515005 EP300Q09472 2414 aaPredicted RBP14.31□□□□□ -0.12
SMAD5-210ENST00000515005 ACACBO00763 2458 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms