RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 STXBP3O00186 592 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 SLC25A27O95847 323 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 HSP90AA1P07900 732 aaKnown RBP13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 XBP1P17861 261 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 PDCP20941 246 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 STAT3P40763 770 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 ERVK-9P63128 1117 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 ERVK-24P63145 666 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 WWC2Q6AWC2 1192 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 GALNT17Q6IS24 598 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 C17orf99Q6UX52 265 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 GPRC5AQ8NFJ5 357 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 CCDC148Q8NFR7 591 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 SPATC1LQ9H0A9 340 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 ZMYND12Q9H0C1 365 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 GLT8D2Q9H1C3 349 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 TXNRD2Q9NNW7 524 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 CTDP1Q9Y5B0 961 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
PDLIM5-220ENST00000514830 PLXNB2O15031 1838 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 CCNA1P78396 465 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 CRHR2Q13324 411 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 FAM184AQ8NB25 1140 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 DAGLBQ8NCG7 672 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 CHST13Q8NET6 341 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 FBXO18Q8NFZ0 1043 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 DDX11Q96FC9 970 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 AGBL1Q96MI9 1066 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 ALG1Q9BT22 464 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 FBXO40Q9UH90 709 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 CCPG1Q9ULG6 757 aa13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 MRPL11Q9Y3B7 192 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-220ENST00000514830 PIK3CDO00329 1044 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 CALML3P27482 149 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 DDIT3P35638 169 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 SNAP25P60880 206 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 SNRNP48Q6IEG0 339 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 CCDC174Q6PII3 467 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 HEATR3Q7Z4Q2 680 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 SHISA4Q96DD7 197 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 PHF20Q9BVI0 1012 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 MOV10L1Q9BXT6 1211 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 MROH8Q9H579 483 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 RAVER2Q9HCJ3 691 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 RNF186Q9NXI6 227 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 LCTP09848 1927 aa13.79□□□□□ -0.2
PDLIM5-220ENST00000514830 OPLAHO14841 1288 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 GNA11P29992 359 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 NAPAP54920 295 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 NPY5RQ15761 445 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 Q3C1V9 767 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 MCTP2Q6DN12 878 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 MCF2L2Q86YR7 1114 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 CPXCR1Q8N123 301 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 ANKRD13CQ8N6S4 541 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 CLEC4DQ8WXI8 215 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 PIBF1Q8WXW3 757 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 COA7Q96BR5 231 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 C8orf76Q96K31 380 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 RIC8AQ9NPQ8 531 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 RIPK3Q9Y572 518 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
PDLIM5-220ENST00000514830 PPFIA3O75145 1194 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 MMP1P03956 469 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 SYT1P21579 422 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 MAPK4P31152 587 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 MRPL12P52815 198 aaKnown RBP13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 TRIM29Q14134 588 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 USH1GQ495M9 461 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 LARP1BQ659C4 914 aaKnown RBP13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 KRT40Q6A162 431 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 ABRAQ8N0Z2 381 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 BICD2Q8TD16 824 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 TRERF1Q96PN7 1200 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 PAGR1Q9BTK6 254 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 ACAD9Q9H845 621 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 C6orf50Q9HD87 102 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 RNF146Q9NTX7 359 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 VPS54Q9P1Q0 977 aa13.77□□□□□ -0.21
PDLIM5-220ENST00000514830 PFASO15067 1338 aa13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 SMCO2A6NFE2 343 aa13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 M0R2N6 131 aa13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 STRNO43815 780 aa13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 ALAS1P13196 640 aa13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 CLK2P49760 499 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 HSD17B4P51659 736 aa13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 CUL5Q93034 780 aa13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 PSTPIP2Q9H939 334 aa13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 CIZ1Q9ULV3 898 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 PCDHA4Q9UN74 947 aa13.76□□□□□ -0.21
PDLIM5-220ENST00000514830 DOCK3Q8IZD9 2030 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms