RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	ABCB11	O95342	1321 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	CNTNAP5	Q8WYK1	1306 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	STRN	O43815	780 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	PPFIA3	O75145	1194 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	FMNL1	O95466	1100 aa	Predicted RBP	11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	HOXD10	P28358	340 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	FCGRT	P55899	365 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	USH1G	Q495M9	461 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	PLEKHH3	Q7Z736	793 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	CCDC83	Q8IWF9	413 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	CD99L2	Q8TCZ2	262 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	COA7	Q96BR5	231 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	RNF26	Q9BY78	433 aa	Predicted RBP	11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	FBXO40	Q9UH90	709 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	MRPL11	Q9Y3B7	192 aa	Known RBP	11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	IVNS1ABP	Q9Y6Y0	642 aa		11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	COL11A1	P12107	1806 aa	Predicted RBP	11.43	□□□□□ -0.58
RACK1-233	ENST00000514455	DOCK3	Q8IZD9	2030 aa		11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	PITPNM1	O00562	1244 aa		11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	TNPO2	O14787	897 aa	Known RBP	11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	PPP1R11	O60927	126 aa	Predicted RBP	11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	CTDNEP1	O95476	244 aa		11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	CTGF	P29279	349 aa		11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	PFKFB3	Q16875	520 aa	Predicted RBP	11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	GPR142	Q7Z601	462 aa		11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	LLPH	Q9BRT6	129 aa	Known RBP	11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	ARHGAP39	Q9C0H5	1083 aa		11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	ACAD9	Q9H845	621 aa		11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	HOMER2	Q9NSB8	354 aa		11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	RNF146	Q9NTX7	359 aa		11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	ORC3	Q9UBD5	711 aa	Predicted RBP	11.42	□□□□□ -0.58
RACK1-233	ENST00000514455	MYH6	P13533	1939 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	CEP350	Q5VT06	3117 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	SLC15A5	A6NIM6	579 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	hCG_1984214	I3L0E3	225 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455		K7ELQ4	463 aa	Predicted RBP	11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	DEXI	O95424	95 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	GNRH1	P01148	92 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	FCER1A	P12319	257 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	SCG2	P13521	617 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	TAL1	P17542	331 aa	Predicted RBP	11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	PTPRE	P23469	700 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	ST3GAL1	Q11201	340 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	PKN1	Q16512	942 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	MUM1L1	Q5H9M0	696 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	HEATR3	Q7Z4Q2	680 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	MCF2L2	Q86YR7	1114 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	HSCB	Q8IWL3	235 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	ANKRD35	Q8N283	1001 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	ZNF713	Q8N859	430 aa	Predicted RBP	11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	RGS22	Q8NE09	1264 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	NSUN7	Q8NE18	718 aa	Known RBP	11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	CLEC4D	Q8WXI8	215 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	DDX11	Q96FC9	970 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	TRIM47	Q96LD4	638 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	CASP8AP2	Q9UKL3	1982 aa		11.41	□□□□□ -0.58
RACK1-233	ENST00000514455	DTNB	O60941	627 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	CAP1	Q01518	475 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	KCTD2	Q14681	263 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	WWC2	Q6AWC2	1192 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	NSMF	Q6X4W1	530 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	DPP9	Q86TI2	863 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	ABRA	Q8N0Z2	381 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	SAMD3	Q8N6K7	520 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	WASF1	Q92558	559 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	TBC1D5	Q92609	795 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	MMP19	Q99542	508 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	NUDT12	Q9BQG2	462 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	MAF1	Q9H063	256 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	BARHL2	Q9NY43	387 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	GJD2	Q9UKL4	321 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455		A0A0G2JMZ2	1700 aa		11.4	□□□□□ -0.58
RACK1-233	ENST00000514455	STK36	Q9NRP7	1315 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	PTPDC1	A2A3K4	754 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	NFIB	O00712	420 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	JAK2	O60674	1132 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	CFB	P00751	764 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	FDPS	P14324	419 aa	Known RBP	11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	NAPA	P54920	295 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	HMGN5	P82970	282 aa	Known RBP	11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	CUL4A	Q13619	759 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	BAAT	Q14032	418 aa	Predicted RBP	11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	GRB14	Q14449	540 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	MORN1	Q5T089	497 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	RNF207	Q6ZRF8	634 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	SMARCC2	Q8TAQ2	1214 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	PSTPIP2	Q9H939	334 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	A1CF	Q9NQ94	594 aa	Known RBP	11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	PRDM10	Q9NQV6	1147 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	SH3GLB2	Q9NR46	395 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	SLC5A4	Q9NY91	659 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	MAP3K20	Q9NYL2	800 aa	Known RBP	11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	SRRD	Q9UH36	339 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	TRIM17	Q9Y577	477 aa		11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.39	□□□□□ -0.59
RACK1-233	ENST00000514455	PFAS	O15067	1338 aa		11.38	□□□□□ -0.59

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