RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 FKBP1BP68106 108 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 FAM160A1Q05DH4 1040 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 PTGDRQ13258 359 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 AP3B2Q13367 1082 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 INF2Q27J81 1249 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 ZSCAN23Q3MJ62 389 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 MCF2L2Q86YR7 1114 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 SLC10A4Q96EP9 437 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 PPP1R9AQ9ULJ8 1098 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 SNCAIPQ9Y6H5 919 aa18.22■□□□□ 0.51
NUP54-214ENST00000514307 KINO60870 393 aaKnown RBP18.21■□□□□ 0.51
NUP54-214ENST00000514307 ICAM1P05362 532 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 MCM7P33993 719 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 USP11P51784 963 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 HMGCS2P54868 508 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 SNAP25P60880 206 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 USH1GQ495M9 461 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 AXDND1Q5T1B0 1012 aaPredicted RBP18.21■□□□□ 0.51
NUP54-214ENST00000514307 CCDC174Q6PII3 467 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
NUP54-214ENST00000514307 RASGRP4Q8TDF6 673 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 TBCKQ8TEA7 893 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 EHMT1Q9H9B1 1298 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 DACT1Q9NYF0 836 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 MAP3K20Q9NYL2 800 aaKnown RBP18.21■□□□□ 0.51
NUP54-214ENST00000514307 TMEM63CQ9P1W3 806 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 FZD1Q9UP38 647 aa18.21■□□□□ 0.51
NUP54-214ENST00000514307 FAM205CA6NFA0 338 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 SPDYE3A6NKU9 549 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 GCOM1H8Y6P7 765 aaPredicted RBP18.2■□□□□ 0.5
NUP54-214ENST00000514307 PIK3CDO00329 1044 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 POLR2MP0CAP2 368 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 GCFC2P16383 781 aaKnown RBP18.2■□□□□ 0.5
NUP54-214ENST00000514307 LIG1P18858 919 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 CLK2P49760 499 aaKnown RBP18.2■□□□□ 0.5
NUP54-214ENST00000514307 ZNF445P59923 1031 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 ATP2C1P98194 919 aaPredicted RBP18.2■□□□□ 0.5
NUP54-214ENST00000514307 LDLRAD1Q5T700 205 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 DLK2Q6UY11 383 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 CATSPERGQ6ZRH7 1159 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 CCDC34Q96HJ3 373 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 MAF1Q9H063 256 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 NUP62CLQ9H1M0 184 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 FBXO28Q9NVF7 368 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 FBXO2Q9UK22 296 aaPredicted RBP18.2■□□□□ 0.5
NUP54-214ENST00000514307 MYPNQ86TC9 1320 aa18.2■□□□□ 0.5
NUP54-214ENST00000514307 CCNT1O60563 726 aaKnown RBP18.19■□□□□ 0.5
NUP54-214ENST00000514307 DSG3P32926 999 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 PRPHP41219 470 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 OAZ1P54368 228 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 LETM2Q2VYF4 491 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 RESP18Q5W5W9 173 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 DTHD1Q6ZMT9 781 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 FASTKD5Q7L8L6 764 aaKnown RBP18.19■□□□□ 0.5
NUP54-214ENST00000514307 C2orf69Q8N8R5 385 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 TIGD1Q96MW7 591 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 PYM1Q9BRP8 204 aaKnown RBP18.19■□□□□ 0.5
NUP54-214ENST00000514307 ELP3Q9H9T3 547 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 SLC38A10Q9HBR0 1119 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 TMEM260Q9NX78 707 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 HOOK1Q9UJC3 728 aaKnown RBP18.19■□□□□ 0.5
NUP54-214ENST00000514307 CCPG1Q9ULG6 757 aa18.19■□□□□ 0.5
NUP54-214ENST00000514307 FAM237AA0A1B0GTK4 181 aa18.18■□□□□ 0.5
NUP54-214ENST00000514307 SPDYE5A6NIY4 337 aa18.18■□□□□ 0.5
NUP54-214ENST00000514307 ADAMTS3O15072 1205 aa18.18■□□□□ 0.5
NUP54-214ENST00000514307 LONP1P36776 959 aaKnown RBP18.18■□□□□ 0.5
NUP54-214ENST00000514307 PABPC4Q13310 644 aaKnown RBP eCLIP18.18■□□□□ 0.5
NUP54-214ENST00000514307 PPIL2Q13356 520 aa18.18■□□□□ 0.5
NUP54-214ENST00000514307 NOM1Q5C9Z4 860 aaKnown RBP18.18■□□□□ 0.5
NUP54-214ENST00000514307 MAP1SQ66K74 1059 aaPredicted RBP18.18■□□□□ 0.5
NUP54-214ENST00000514307 PPP4R3AQ6IN85 833 aa18.18■□□□□ 0.5
NUP54-214ENST00000514307 PROCA1Q8NCQ7 364 aaPredicted RBP18.18■□□□□ 0.5
NUP54-214ENST00000514307 ENGASEQ8NFI3 743 aa18.18■□□□□ 0.5
NUP54-214ENST00000514307 SDF4Q9BRK5 362 aa18.18■□□□□ 0.5
NUP54-214ENST00000514307 TNMDQ9H2S6 317 aa18.18■□□□□ 0.5
NUP54-214ENST00000514307 GPBP1L1Q9HC44 474 aaPredicted RBP18.18■□□□□ 0.5
NUP54-214ENST00000514307 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.18■□□□□ 0.5
NUP54-214ENST00000514307 MYH4Q9Y623 1939 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 A0A1B0GVL5 298 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 VWA5AO00534 786 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 MEIS2O14770 477 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 MARCH6O60337 910 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 NR1I2O75469 434 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 SYKP43405 635 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 UBE2SQ16763 222 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 TKFCQ3LXA3 575 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 USP17L6PQ6QN14 398 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 FMR1NBQ8N0W7 255 aaPredicted RBP18.17■□□□□ 0.5
NUP54-214ENST00000514307 C4orf32Q8N8J7 132 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 CLSTN2Q9H4D0 955 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 ADAMTS5Q9UNA0 930 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 RABGAP1Q9Y3P9 1069 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 SSC5DA1L4H1 1573 aa18.17■□□□□ 0.5
NUP54-214ENST00000514307 SCN4AP35499 1836 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 GOLGA6L3A6NEY3 463 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 ZNF202O95125 648 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 HOXA7P31268 230 aaPredicted RBP18.16■□□□□ 0.5
NUP54-214ENST00000514307 NDUFA8P51970 172 aa18.16■□□□□ 0.5
NUP54-214ENST00000514307 SNW1Q13573 536 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms