RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 SUPT20HL2P0C7V6 817 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 CYP2C9P11712 490 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 ICAM3P32942 547 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 BEX3Q00994 111 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 COG2Q14746 738 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 PTPN21Q16825 1174 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 CTC1Q2NKJ3 1217 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 LRRC24Q50LG9 513 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 ZBTB33Q86T24 672 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 ZGPATQ8N5A5 531 aaKnown RBP9.47□□□□□ -0.89
CLDND1-229ENST00000513988 MB21D1Q8N884 522 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 DNAAF4Q8WXU2 420 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 HAUS7Q99871 368 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 GNL3LQ9NVN8 582 aaKnown RBP9.47□□□□□ -0.89
CLDND1-229ENST00000513988 ZZEF1O43149 2961 aa9.47□□□□□ -0.89
CLDND1-229ENST00000513988 CEP295Q9C0D2 2601 aa9.46□□□□□ -0.89
CLDND1-229ENST00000513988 GJB5O95377 273 aa9.46□□□□□ -0.9
CLDND1-229ENST00000513988 ATXN1P54253 815 aaKnown RBP9.46□□□□□ -0.9
CLDND1-229ENST00000513988 DEFB103AP81534 67 aa9.46□□□□□ -0.9
CLDND1-229ENST00000513988 MSL3Q8N5Y2 521 aaKnown RBP9.46□□□□□ -0.9
CLDND1-229ENST00000513988 C8orf58Q8NAV2 365 aa9.46□□□□□ -0.9
CLDND1-229ENST00000513988 RETREG2Q8NC44 543 aa9.46□□□□□ -0.9
CLDND1-229ENST00000513988 CYP2W1Q8TAV3 490 aa9.46□□□□□ -0.9
CLDND1-229ENST00000513988 RUBCNQ92622 972 aa9.46□□□□□ -0.9
CLDND1-229ENST00000513988 KIAA1683Q9H0B3 1180 aa9.46□□□□□ -0.9
CLDND1-229ENST00000513988 ALDH8A1Q9H2A2 487 aaPredicted RBP9.46□□□□□ -0.9
CLDND1-229ENST00000513988 GRIN2DO15399 1336 aa9.46□□□□□ -0.9
CLDND1-229ENST00000513988 TET1Q8NFU7 2136 aa9.46□□□□□ -0.9
CLDND1-229ENST00000513988 GPR75-ASB3A0A0A6YYF3 556 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 CTAGE5O15320 804 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 ADCY6O43306 1168 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 TBX10O75333 385 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 MAP4K4O95819 1239 aaPredicted RBP9.45□□□□□ -0.9
CLDND1-229ENST00000513988 SLC25A27O95847 323 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 SNAI1O95863 264 aaPredicted RBP9.45□□□□□ -0.9
CLDND1-229ENST00000513988 GH2P01242 217 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 FGFR2P21802 821 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 GPM6BQ13491 265 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 CCDC144BQ3MJ40 725 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 FAM117BQ6P1L5 589 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 G2E3Q7L622 706 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 RPGRIP1Q96KN7 1286 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 SAMD11Q96NU1 681 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 TANGO6Q9C0B7 1094 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 DHX36Q9H2U1 1008 aaKnown RBP9.45□□□□□ -0.9
CLDND1-229ENST00000513988 DNAJC18Q9H819 358 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 ZSWIM6Q9HCJ5 1215 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 DENND2AQ9ULE3 1009 aa9.45□□□□□ -0.9
CLDND1-229ENST00000513988 H3BNC9 293 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 IQCF3P0C7M6 154 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 PSMC6P62333 389 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 FKBP5Q13451 457 aaPredicted RBP9.44□□□□□ -0.9
CLDND1-229ENST00000513988 ACVR2BQ13705 512 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 ANGPT1Q15389 498 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 EPC2Q52LR7 807 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 FOXP4Q8IVH2 680 aaPredicted RBP9.44□□□□□ -0.9
CLDND1-229ENST00000513988 TEX11Q8IYF3 940 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 DCLK2Q8N568 766 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 LPIN2Q92539 896 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 TRMT13Q9NUP7 481 aaKnown RBP9.44□□□□□ -0.9
CLDND1-229ENST00000513988 ABCF2Q9UG63 623 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 CDV3Q9UKY7 258 aaKnown RBP9.44□□□□□ -0.9
CLDND1-229ENST00000513988 SIPA1L1O43166 1804 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 SPEGQ15772 3267 aa9.44□□□□□ -0.9
CLDND1-229ENST00000513988 BPTFQ12830 3046 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 FRYQ5TBA9 3013 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 TANC1Q9C0D5 1861 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 SEMA3EO15041 775 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 ZEB2O60315 1214 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 EYA4O95677 639 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 NDUFV1P49821 464 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 HYAL1Q12794 435 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 RAB3GAP1Q15042 981 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 SPTY2D1Q68D10 685 aaPredicted RBP9.43□□□□□ -0.9
CLDND1-229ENST00000513988 NOL8Q76FK4 1167 aaKnown RBP9.43□□□□□ -0.9
CLDND1-229ENST00000513988 TMC2Q8TDI7 906 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 ACER1Q8TDN7 264 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 PHF7Q9BWX1 381 aaPredicted RBP9.43□□□□□ -0.9
CLDND1-229ENST00000513988 MFSD1Q9H3U5 465 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 IGFLR1Q9H665 355 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 INSL6Q9Y581 213 aa9.43□□□□□ -0.9
CLDND1-229ENST00000513988 HELZ2Q9BYK8 2649 aaKnown RBP9.42□□□□□ -0.9
CLDND1-229ENST00000513988 GRM8O00222 908 aa9.42□□□□□ -0.9
CLDND1-229ENST00000513988 ZNF853P0CG23 659 aa9.42□□□□□ -0.9
CLDND1-229ENST00000513988 CLCN5P51795 746 aa9.42□□□□□ -0.9
CLDND1-229ENST00000513988 NKX3-2P78367 333 aa9.42□□□□□ -0.9
CLDND1-229ENST00000513988 FLIIQ13045 1269 aa9.42□□□□□ -0.9
CLDND1-229ENST00000513988 FSCN1Q16658 493 aaKnown RBP9.42□□□□□ -0.9
CLDND1-229ENST00000513988 MAMDC4Q6UXC1 1216 aa9.42□□□□□ -0.9
CLDND1-229ENST00000513988 METTL16Q86W50 562 aaKnown RBP9.42□□□□□ -0.9
CLDND1-229ENST00000513988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.42□□□□□ -0.9
CLDND1-229ENST00000513988 ABHD16BQ9H3Z7 469 aa9.42□□□□□ -0.9
CLDND1-229ENST00000513988 INCENPQ9NQS7 918 aa9.42□□□□□ -0.9
CLDND1-229ENST00000513988 R4GN57 208 aa9.42□□□□□ -0.9
CLDND1-229ENST00000513988 LINC01565O15544 149 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 LDHCP07864 332 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 NUDT7P0C024 238 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 RRP1P56182 461 aaKnown RBP9.41□□□□□ -0.9
CLDND1-229ENST00000513988 GNAI1P63096 354 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms