RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 TNKSO95271 1327 aa13.05□□□□□ -0.32
NFKB1-211ENST00000513803 PARP14Q460N5 1801 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 USP17L12C9JPN9 530 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 USP17L21D6R901 530 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 F5H6K3 240 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
NFKB1-211ENST00000513803 IL9P15248 144 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 OAZ1P54368 228 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 CNTN2Q02246 1040 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 KLRC3Q07444 240 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 C16orf86Q6ZW13 317 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 DDRGK1Q96HY6 314 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-211ENST00000513803 UPF3BQ9BZI7 483 aaKnown RBP13.04□□□□□ -0.32
NFKB1-211ENST00000513803 SLC38A10Q9HBR0 1119 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 FAM50BQ9Y247 325 aa13.04□□□□□ -0.32
NFKB1-211ENST00000513803 MCM3APO60318 1980 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 PITPNM1O00562 1244 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 IQCF3P0C7M6 154 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 BFSP2Q13515 415 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 FAM133AQ8N9E0 248 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 GDPD5Q8WTR4 605 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 KIFC2Q96AC6 838 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 TGS1Q96RS0 853 aaKnown RBP13.03□□□□□ -0.32
NFKB1-211ENST00000513803 SUGCTQ9HAC7 445 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 GPHNQ9NQX3 736 aaPredicted RBP13.03□□□□□ -0.32
NFKB1-211ENST00000513803 POLR3EQ9NVU0 708 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 NOP58Q9Y2X3 529 aaKnown RBP13.03□□□□□ -0.32
NFKB1-211ENST00000513803 ZNF532Q9HCE3 1301 aa13.03□□□□□ -0.32
NFKB1-211ENST00000513803 ZFHX2Q9C0A1 2572 aaPredicted RBP13.03□□□□□ -0.32
NFKB1-211ENST00000513803 ZNF318Q5VUA4 2279 aa13.02□□□□□ -0.32
NFKB1-211ENST00000513803 BCAR3O75815 825 aa13.02□□□□□ -0.33
NFKB1-211ENST00000513803 FDX1P10109 184 aa13.02□□□□□ -0.33
NFKB1-211ENST00000513803 TRMT2AQ8IZ69 625 aaKnown RBP13.02□□□□□ -0.33
NFKB1-211ENST00000513803 ACAD9Q9H845 621 aa13.02□□□□□ -0.33
NFKB1-211ENST00000513803 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
NFKB1-211ENST00000513803 PDGFCQ9NRA1 345 aa13.02□□□□□ -0.33
NFKB1-211ENST00000513803 PRKAG3Q9UGI9 489 aa13.02□□□□□ -0.33
NFKB1-211ENST00000513803 FEM1BQ9UK73 627 aa13.02□□□□□ -0.33
NFKB1-211ENST00000513803 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
NFKB1-211ENST00000513803 SPTBN4Q9H254 2564 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 TRIOO75962 3097 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 CFAP54Q96N23 3096 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 LCHNA4D1U4 455 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 PRKAB2O43741 272 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 NDUFB10O96000 172 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
NFKB1-211ENST00000513803 ERVK-21P61565 698 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 LRRFIP1Q32MZ4 808 aaKnown RBP13.01□□□□□ -0.33
NFKB1-211ENST00000513803 FAM47CQ5HY64 1035 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 TAPT1Q6NXT6 567 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 KIAA1211Q6ZU35 1233 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 HFE2Q6ZVN8 426 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 SPRED2Q7Z698 418 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.01□□□□□ -0.33
NFKB1-211ENST00000513803 RAD9AQ99638 391 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 MTG1Q9BT17 334 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-211ENST00000513803 HOMER2Q9NSB8 354 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 NYAP2Q9P242 653 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 CTNNA3Q9UI47 895 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 MTUS1Q9ULD2 1270 aa13.01□□□□□ -0.33
NFKB1-211ENST00000513803 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 TCRBV5S4A2TA0A5A2 114 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 CPT1AP50416 773 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 PURAQ00577 322 aaKnown RBP13□□□□□ -0.33
NFKB1-211ENST00000513803 BRDTQ58F21 947 aaPredicted RBP13□□□□□ -0.33
NFKB1-211ENST00000513803 EEPD1Q7L9B9 569 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 AACSQ86V21 672 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 NEK9Q8TD19 979 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 CRBNQ96SW2 442 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 PRRX2Q99811 253 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 VTA1Q9NP79 307 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 NOD1Q9Y239 953 aa13□□□□□ -0.33
NFKB1-211ENST00000513803 NAV1Q8NEY1 1877 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 MBD4O95243 580 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 MYL3P08590 195 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 PTGS1P23219 599 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 PTPN5P54829 565 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 WDR5P61964 334 aaKnown RBP12.99□□□□□ -0.33
NFKB1-211ENST00000513803 PTPN11Q06124 597 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-211ENST00000513803 NBPF20Q3BBV1 942 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 DUSP28Q4G0W2 176 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 NFRKBQ6P4R8 1299 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
NFKB1-211ENST00000513803 A1CFQ9NQ94 594 aaKnown RBP12.99□□□□□ -0.33
NFKB1-211ENST00000513803 CLIP2Q9UDT6 1046 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 CACNA1HO95180 2353 aa12.99□□□□□ -0.33
NFKB1-211ENST00000513803 LINC01553A4QN01 128 aa12.98□□□□□ -0.33
NFKB1-211ENST00000513803 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
NFKB1-211ENST00000513803 H3BQ06 376 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-211ENST00000513803 GOLIM4O00461 696 aa12.98□□□□□ -0.33
NFKB1-211ENST00000513803 KPNA6O60684 536 aa12.98□□□□□ -0.33
NFKB1-211ENST00000513803 GJB5O95377 273 aa12.98□□□□□ -0.33
NFKB1-211ENST00000513803 PARNO95453 639 aaKnown RBP12.98□□□□□ -0.33
NFKB1-211ENST00000513803 TRIM27P14373 513 aa12.98□□□□□ -0.33
NFKB1-211ENST00000513803 ZP2Q05996 745 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms