RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 STIM2Q9P246 746 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 ZNF609O15014 1411 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 ZCCHC11Q5TAX3 1644 aaKnown RBP8.54□□□□□ -1.04
CLCN3-209ENST00000513761 KRT5P13647 590 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 DYNLL1P63167 89 aaKnown RBP8.54□□□□□ -1.04
CLCN3-209ENST00000513761 RPAINQ86UA6 219 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 LMNTD2Q8IXW0 634 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 FNBP4Q8N3X1 1017 aaPredicted RBP8.54□□□□□ -1.04
CLCN3-209ENST00000513761 VEZTQ9HBM0 779 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 ATP1A1P05023 1023 aaKnown RBP8.54□□□□□ -1.04
CLCN3-209ENST00000513761 DESP17661 470 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 RFC4P35249 363 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 GPBP1Q86WP2 473 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 ENGASEQ8NFI3 743 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 UBN2Q6ZU65 1347 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 KCNJ6P48051 423 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 NEK8Q86SG6 692 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 STMN2Q93045 179 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 DHTKD1Q96HY7 919 aaPredicted RBP8.54□□□□□ -1.04
CLCN3-209ENST00000513761 L2HGDHQ9H9P8 463 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 POLD4Q9HCU8 107 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 ATP8A1Q9Y2Q0 1164 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 IQGAP1P46940 1657 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 ESYT3A0FGR9 886 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 KLRF2D3W0D1 207 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 H2AFXP16104 143 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 VPS41P49754 854 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 ZNF365Q70YC5 407 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 TC2NQ8N9U0 490 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 RETREG2Q8NC44 543 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 MLXIPQ9HAP2 919 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 CPSF2Q9P2I0 782 aaKnown RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 MROH7-TTC4A0A0A0MT08 1334 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 TTC26A0AVF1 554 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 SNAP23O00161 211 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 DDAH1O94760 285 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 XRCC5P13010 732 aaKnown RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 GBP1P32455 592 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 HAUS3Q68CZ6 603 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 CCDC63Q8NA47 563 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 SMC6Q96SB8 1091 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 PANK4Q9NVE7 773 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 SETBP1Q9Y6X0 1596 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 TBC1D8O95759 1140 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 SLC8A1P32418 973 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 GUCY1A2P33402 732 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 USP14P54578 494 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 SF3B2Q13435 895 aaKnown RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 PPFIBP2Q8ND30 876 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 N4BP2L2Q92802 583 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 FRMPD2Q68DX3 1309 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 ADGRB3O60242 1522 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 FDPSP14324 419 aaKnown RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 STX2P32856 288 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 STAT1P42224 750 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 PRCPP42785 496 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 ALS2CLQ60I27 953 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 RAD9BQ6WBX8 426 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 ANKRD2Q9GZV1 360 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 TRIM10Q9UDY6 481 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 ARMCX3Q9UH62 379 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 NOVA2Q9UNW9 492 aaKnown RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 DNM3Q9UQ16 869 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 ERCC6L2Q5T890 1561 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 CTNND1O60716 968 aaKnown RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 ADAM9Q13443 819 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 PARP10Q53GL7 1025 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 USPL1Q5W0Q7 1092 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 MYCT1Q8N699 235 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 STRBPQ96SI9 672 aaKnown RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 CHP1Q99653 195 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 AP1M1Q9BXS5 423 aa8.53□□□□□ -1.04
CLCN3-209ENST00000513761 SETD1BQ9UPS6 1966 aaKnown RBP8.53□□□□□ -1.04
CLCN3-209ENST00000513761 H7C1W4 665 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 RIMBP2O15034 1052 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 H2AFZP0C0S5 128 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 PLCG2P16885 1265 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 CACNB1Q02641 598 aaPredicted RBP8.52□□□□□ -1.04
CLCN3-209ENST00000513761 FAM26FQ5R3K3 315 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 H2AFVQ71UI9 128 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 FAM133AQ8N9E0 248 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 CCDC197Q8NCU1 140 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 SYNCQ9H7C4 482 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 CEP152O94986 1710 aa8.52□□□□□ -1.04
CLCN3-209ENST00000513761 ZNF185O15231 689 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 TRAPPC10P48553 1259 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 SCARF1Q14162 830 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 LLGL1Q15334 1064 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 FAM133BQ5BKY9 247 aaKnown RBP8.52□□□□□ -1.05
CLCN3-209ENST00000513761 NFRKBQ6P4R8 1299 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 TPTE2Q6XPS3 522 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 FMNL3Q8IVF7 1028 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 REXO1L1PQ8IX06 675 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 THAP9Q9H5L6 903 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 LY9Q9HBG7 655 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 SALL3Q9BXA9 1300 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 ERVV-2B6SEH9 535 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 NCK2O43639 380 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 PLCG1P19174 1290 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms