RNA–Protein interactions for RNA: ENST00000513757.5

LPCAT1-205, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 4

Gene LPCAT1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-205ENST00000513757 AP5M1Q9H0R1 490 aa11.62□□□□□ -0.55
LPCAT1-205ENST00000513757 HOMER2Q9NSB8 354 aa11.62□□□□□ -0.55
LPCAT1-205ENST00000513757 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
LPCAT1-205ENST00000513757 CXXC1Q9P0U4 656 aaPredicted RBP11.62□□□□□ -0.55
LPCAT1-205ENST00000513757 Q9Y3F1 56 aa11.62□□□□□ -0.55
LPCAT1-205ENST00000513757 LRRC37A2A6NM11 1700 aa11.62□□□□□ -0.55
LPCAT1-205ENST00000513757 ZNF536O15090 1300 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 SOWAHBA6NEL2 793 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 TMEM232C9JQI7 657 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 PRDM1O75626 825 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 TSPY3P0CV98 308 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 TSPY8P0CW00 308 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 PDE4BQ07343 736 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 FSCN1Q16658 493 aaKnown RBP11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 IQSEC1Q6DN90 963 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 RPUSD2Q8IZ73 545 aaKnown RBP11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 ADAMTS19Q8TE59 1207 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 STAG1Q8WVM7 1258 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 NACAP1Q9BZK3 213 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 NKX2-4Q9H2Z4 354 aa11.61□□□□□ -0.55
LPCAT1-205ENST00000513757 GRIN2DO15399 1336 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 PATL2C9JE40 543 aaKnown RBP11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 SMARCA5O60264 1052 aaPredicted RBP11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 APPP05067 770 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 SLC3A2P08195 630 aaKnown RBP11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 SMPD1P17405 629 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 IGFBP4P22692 258 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 SLC1A4P43007 532 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 OTOP2Q7RTS6 562 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 IFNL3Q8IZI9 196 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 IL27Q8NEV9 243 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 AGBL1Q96MI9 1066 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 TRERF1Q96PN7 1200 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 UHRF1Q96T88 793 aaPredicted RBP11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 VTA1Q9NP79 307 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 YBX2Q9Y2T7 364 aaKnown RBP11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 PCDHA11Q9Y5I1 949 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 SLC4A7Q9Y6M7 1214 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 BRWD1Q9NSI6 2320 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 CHD7Q9P2D1 2997 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 UMODL1Q5DID0 1318 aa11.6□□□□□ -0.55
LPCAT1-205ENST00000513757 LOC102724159A0A0B4J2E5 919 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 M0R2C6 588 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 DYNC1LI2O43237 492 aaPredicted RBP11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 PFKMP08237 780 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 SUPT20HL2P0C7V6 817 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 ALAS1P13196 640 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 CCL23P55773 120 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 TFAP4Q01664 338 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 IKQ13123 557 aaPredicted RBP11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 PWP2Q15269 919 aaKnown RBP11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 CCDC85BQ15834 202 aaPredicted RBP11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 TAPT1Q6NXT6 567 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 MORC4Q8TE76 937 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 TRPV6Q9H1D0 765 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 CYP39A1Q9NYL5 469 aa11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 ISY1Q9ULR0 285 aaKnown RBP11.59□□□□□ -0.55
LPCAT1-205ENST00000513757 B4GALT4O60513 344 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 MCCP23508 829 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 AAK1Q2M2I8 961 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 PPP2R2DQ66LE6 453 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 RCSD1Q6JBY9 416 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 FBXO16Q8IX29 292 aaPredicted RBP11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 NAPBQ9H115 298 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 ALDH8A1Q9H2A2 487 aaPredicted RBP11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 PDGFCQ9NRA1 345 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 PIEZO1Q92508 2521 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 LCTP09848 1927 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 SCN10AQ9Y5Y9 1956 aa11.58□□□□□ -0.56
LPCAT1-205ENST00000513757 ATP2A2P16615 1042 aaKnown RBP11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 POU3F3P20264 500 aaPredicted RBP11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 PPARAQ07869 468 aa11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 DUSP28Q4G0W2 176 aa11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 VWCEQ96DN2 955 aa11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 DCTPP1Q9H773 170 aa11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 ADD3Q9UEY8 706 aaKnown RBP11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 STX8Q9UNK0 236 aa11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 TRANK1O15050 2925 aa11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 TCF20Q9UGU0 1960 aaKnown RBP11.57□□□□□ -0.56
LPCAT1-205ENST00000513757 ZBBXA8MT70 800 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 ICAM1P05362 532 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 RFC2P35250 354 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 CPT1AP50416 773 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 RABGGTBP53611 331 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 PSMC6P62333 389 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 MUM1L1Q5H9M0 696 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 NSMFQ6X4W1 530 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 KIAA1211Q6ZU35 1233 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 KCTD1Q719H9 257 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 EEPD1Q7L9B9 569 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 SCLYQ96I15 445 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 CCPG1Q9ULG6 757 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 TNKSO95271 1327 aa11.56□□□□□ -0.56
LPCAT1-205ENST00000513757 TTC41PQ6P2S7 1318 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms