RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 DHX40Q8IX18 779 aaKnown RBP9.5□□□□□ -0.89
RNF4-220ENST00000513578 IQUBQ8NA54 791 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 TBCKQ8TEA7 893 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 EPSTI1Q96J88 318 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 MTMR9Q96QG7 549 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 AMNQ9BXJ7 453 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 TMEM39BQ9GZU3 492 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 CUEDC2Q9H467 287 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 VCPKMTQ9H867 229 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 CNOT7Q9UIV1 285 aaKnown RBP9.5□□□□□ -0.89
RNF4-220ENST00000513578 PCDHA5Q9Y5H7 936 aa9.5□□□□□ -0.89
RNF4-220ENST00000513578 A0A087X0B3 334 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 GOLGA6L19H0YKK7 550 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 H7C1D1 291 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 AP5Z1O43299 807 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 EDIL3O43854 480 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 NEMFO60524 1076 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 CTNND1O60716 968 aaKnown RBP9.49□□□□□ -0.89
RNF4-220ENST00000513578 SMC2O95347 1197 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 FOSP01100 380 aaPredicted RBP9.49□□□□□ -0.89
RNF4-220ENST00000513578 OR52Z1P0C646 297 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 LMNB1P20700 586 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 SLC16A2P36021 539 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 TXLNAP40222 546 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
RNF4-220ENST00000513578 USP11P51784 963 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 RASSF7Q02833 373 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 PNOCQ13519 176 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 MORC3Q14149 939 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 PDIA5Q14554 519 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 SPECC1Q5M775 1068 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 COL13A1Q5TAT6 717 aaPredicted RBP9.49□□□□□ -0.89
RNF4-220ENST00000513578 FBXO11Q86XK2 927 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 PLA2G4DQ86XP0 818 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 APOBEC3FQ8IUX4 373 aaKnown RBP9.49□□□□□ -0.89
RNF4-220ENST00000513578 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 TNS4Q8IZW8 715 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 GPC2Q8N158 579 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 MLKLQ8NB16 471 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 NLGN2Q8NFZ4 835 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 CHURC1Q8WUH1 139 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 MBOAT7Q96N66 472 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 GSDMAQ96QA5 445 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 DEFB129Q9H1M3 183 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 TMEM60Q9H2L4 133 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 PSTPIP2Q9H939 334 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 MAGEF1Q9HAY2 307 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 BIN2Q9UBW5 565 aaPredicted RBP9.49□□□□□ -0.89
RNF4-220ENST00000513578 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 ZNF112Q9UJU3 913 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 PPP2R3BQ9Y5P8 575 aa9.49□□□□□ -0.89
RNF4-220ENST00000513578 POLR2AP24928 1970 aaKnown RBP9.49□□□□□ -0.89
RNF4-220ENST00000513578 SMCHD1A6NHR9 2005 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 RBBP6Q7Z6E9 1792 aaKnown RBP9.48□□□□□ -0.89
RNF4-220ENST00000513578 CYP3A7-CYP3A51PA0A087WV96 503 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 SHTN1A0MZ66 631 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 BECN2A8MW95 431 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 TMEM232C9JQI7 657 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 PIK3CDO00329 1044 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 HSPA6P17066 643 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 CYP3A7P24462 503 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 STAT2P52630 851 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 DPYDQ12882 1025 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 KIF4BQ2VIQ3 1234 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 LETM2Q2VYF4 491 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 DPCR1Q3MIW9 517 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 JAKMIP3Q5VZ66 844 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 DCAF15Q66K64 600 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 PDXDC2PQ6P474 469 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 ZSCAN30Q86W11 494 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 IGSF22Q8N9C0 903 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 ACER1Q8TDN7 264 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 CRYGNQ8WXF5 182 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 LPAR1Q92633 364 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 SMARCE1Q969G3 411 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 PAGE5Q96GU1 130 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 MRFAP1L1Q96HT8 127 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 RANBP17Q9H2T7 1088 aaKnown RBP9.48□□□□□ -0.89
RNF4-220ENST00000513578 TMEM260Q9NX78 707 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 GPRC5DQ9NZD1 345 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 FEM1BQ9UK73 627 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 MAN1B1Q9UKM7 699 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 PRR12Q9ULL5 1215 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 PCDHA1Q9Y5I3 950 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 ZNF541Q9H0D2 1346 aa9.48□□□□□ -0.89
RNF4-220ENST00000513578 ESPNB1AK53 854 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 MEIS2O14770 477 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 FOXN1O15353 648 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 GTPBP6O43824 516 aaPredicted RBP9.47□□□□□ -0.89
RNF4-220ENST00000513578 CCNT1O60563 726 aaKnown RBP9.47□□□□□ -0.89
RNF4-220ENST00000513578 ERCC5P28715 1186 aaPredicted RBP9.47□□□□□ -0.89
RNF4-220ENST00000513578 HOXA7P31268 230 aaPredicted RBP9.47□□□□□ -0.89
RNF4-220ENST00000513578 ECE1P42892 770 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 ZNF75DP51815 510 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 TPM4P67936 248 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 NCAPHQ15003 741 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 CDAN1Q8IWY9 1227 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 SAMD3Q8N6K7 520 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 ERCC4Q92889 916 aaPredicted RBP9.47□□□□□ -0.89
RNF4-220ENST00000513578 DHX58Q96C10 678 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms