RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-210	ENST00000513153	ITGB3	P05106	788 aa		6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153	MCM4	P33991	863 aa		6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153	CNR2	P34972	360 aa		6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153	ZNF200	P98182	395 aa	Predicted RBP	6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153	PLEKHN1	Q494U1	663 aa	Predicted RBP	6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153	NUP43	Q8NFH3	380 aa		6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153	FNIP1	Q8TF40	1166 aa		6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153	CDADC1	Q9BWV3	514 aa		6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153	DUSP10	Q9Y6W6	482 aa		6.62	□□□□□ -1.35
LINC01088-210	ENST00000513153		A0A1W2PQ45	241 aa	Predicted RBP	6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153		A0A1W2PQY0	241 aa		6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153	MSL3P1	P0C860	447 aa		6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153	ENDOU	P21128	410 aa	Known RBP	6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153	CPZ	Q66K79	652 aa		6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153	ZC3H14	Q6PJT7	736 aa	Known RBP	6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153	TMEM87A	Q8NBN3	555 aa		6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153	NKD1	Q969G9	470 aa		6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153	JMJD8	Q96S16	334 aa		6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153	SUCO	Q9UBS9	1254 aa	Known RBP	6.61	□□□□□ -1.35
LINC01088-210	ENST00000513153	C1QTNF3-AMACR	E9PGA6	284 aa		6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	PLA2G1B	P04054	148 aa	Known RBP	6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	ZNF16	P17020	682 aa	Predicted RBP	6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	TARBP2	Q15633	366 aa	Known RBP	6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	INTS3	Q68E01	1043 aa	Known RBP	6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	PPFIBP1	Q86W92	1011 aa		6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	MENT	Q9BUN1	341 aa		6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	SLC12A9	Q9BXP2	914 aa		6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	IMPACT	Q9P2X3	320 aa		6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	FBXL21	Q9UKT6	434 aa		6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	ZNRF3	Q9ULT6	936 aa		6.6	□□□□□ -1.35
LINC01088-210	ENST00000513153	MAPKAPK2	P49137	400 aa		6.59	□□□□□ -1.35
LINC01088-210	ENST00000513153	FOXO4	P98177	505 aa		6.59	□□□□□ -1.35
LINC01088-210	ENST00000513153	NR1I3	Q14994	352 aa		6.59	□□□□□ -1.35
LINC01088-210	ENST00000513153	C7orf61	Q8IZ16	206 aa		6.59	□□□□□ -1.35
LINC01088-210	ENST00000513153	ZNF526	Q8TF50	670 aa	Predicted RBP	6.59	□□□□□ -1.35
LINC01088-210	ENST00000513153	SPON2	Q9BUD6	331 aa		6.59	□□□□□ -1.35
LINC01088-210	ENST00000513153	MRI	Q9BWK5	157 aa		6.59	□□□□□ -1.35
LINC01088-210	ENST00000513153	PMF1-BGLAP	U3KQ54	211 aa		6.59	□□□□□ -1.35
LINC01088-210	ENST00000513153	GSN	P06396	782 aa		6.58	□□□□□ -1.36
LINC01088-210	ENST00000513153	MVK	Q03426	396 aa		6.58	□□□□□ -1.36
LINC01088-210	ENST00000513153	SAPCD2	Q86UD0	394 aa		6.58	□□□□□ -1.36
LINC01088-210	ENST00000513153	KIAA0825	Q8IV33	1275 aa		6.58	□□□□□ -1.36
LINC01088-210	ENST00000513153	TAB3	Q8N5C8	712 aa	Predicted RBP	6.58	□□□□□ -1.36
LINC01088-210	ENST00000513153	LOXL4	Q96JB6	756 aa		6.58	□□□□□ -1.36
LINC01088-210	ENST00000513153	RBM15	Q96T37	977 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
LINC01088-210	ENST00000513153	SRRT	Q9BXP5	876 aa	Known RBP	6.58	□□□□□ -1.36
LINC01088-210	ENST00000513153	SH3D21	A4FU49	640 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	FAM86C2P	A6NEL3	165 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	NOBOX	O60393	691 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	C6	P13671	934 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	ZNF20	P17024	532 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	GDF5	P43026	501 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	PMS1	P54277	932 aa	Known RBP	6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	TMCO4	Q5TGY1	634 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	C8orf49	Q96NF6	230 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	KRTAP3-1	Q9BYR8	98 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	BACH2	Q9BYV9	841 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	LNPK	Q9C0E8	428 aa		6.57	□□□□□ -1.36
LINC01088-210	ENST00000513153	ZBTB7C	A1YPR0	619 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153		H0Y8X5	98 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	FBLN1	P23142	703 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	ZNF76	P36508	570 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	GJA9	P57773	515 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	ANKRD39	Q53RE8	183 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	DCAF15	Q66K64	600 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	DHRS1	Q96LJ7	313 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	C1QTNF3	Q9BXJ4	246 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	PLA2G2D	Q9UNK4	145 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	FAN1	Q9Y2M0	1017 aa		6.56	□□□□□ -1.36
LINC01088-210	ENST00000513153	FGF10	O15520	208 aa	Predicted RBP	6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	GSTM1	P09488	218 aa		6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	ATF2	P15336	505 aa		6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	ZNF445	P59923	1031 aa		6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	HTRA3	P83110	453 aa		6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	TDRD10	Q5VZ19	366 aa	Known RBP	6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	CCDC144CP	Q8IYA2	1237 aa		6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	DSCC1	Q9BVC3	393 aa		6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	HCFC2	Q9Y5Z7	792 aa		6.55	□□□□□ -1.36
LINC01088-210	ENST00000513153	SRGAP3	O43295	1099 aa		6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	SLPI	P03973	132 aa		6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	DBH	P09172	617 aa		6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	ZYX	Q15942	572 aa	Known RBP	6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	USP48	Q86UV5	1035 aa		6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	CARF	Q8N187	725 aa		6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	TTC9B	Q8N6N2	239 aa		6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	SMARCC1	Q92922	1105 aa	Predicted RBP	6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	SAMD11	Q96NU1	681 aa		6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	GP6	Q9HCN6	339 aa		6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153	METTL5	Q9NRN9	209 aa	Known RBP	6.54	□□□□□ -1.36
LINC01088-210	ENST00000513153		A0A1W2PQ27	194 aa		6.53	□□□□□ -1.36
LINC01088-210	ENST00000513153		A0A1W2PQ64	194 aa		6.53	□□□□□ -1.36
LINC01088-210	ENST00000513153		A0A1W2PQC6	194 aa		6.53	□□□□□ -1.36
LINC01088-210	ENST00000513153		A0A1W2PQD8	194 aa		6.53	□□□□□ -1.36
LINC01088-210	ENST00000513153	IMPDH2	P12268	514 aa		6.53	□□□□□ -1.36
LINC01088-210	ENST00000513153	TACR2	P21452	398 aa		6.53	□□□□□ -1.36
LINC01088-210	ENST00000513153	FANCC	Q00597	558 aa		6.53	□□□□□ -1.36
LINC01088-210	ENST00000513153	HLA-DQA1	Q5Y7H0	255 aa		6.53	□□□□□ -1.36

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