RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 PTF1AQ7RTS3 328 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 SGMS1Q86VZ5 419 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 BLIDQ8IZY5 108 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 GPR101Q96P66 508 aaPredicted RBP11.87□□□□□ -0.51
PDCD6-209ENST00000512466 RNF26Q9BY78 433 aaPredicted RBP11.87□□□□□ -0.51
PDCD6-209ENST00000512466 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDCD6-209ENST00000512466 LRRIQ3A6PVS8 624 aaPredicted RBP11.87□□□□□ -0.51
PDCD6-209ENST00000512466 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
PDCD6-209ENST00000512466 DPYDQ12882 1025 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 C8orf74Q6P047 294 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 CABP7Q86V35 215 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 ANKZF1Q9H8Y5 726 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 MROH5Q6ZUA9 1318 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 MAP2K2P36507 400 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 TMC4Q7Z404 712 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 CCDC91Q7Z6B0 441 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 ADAT2Q7Z6V5 191 aaKnown RBP11.87□□□□□ -0.51
PDCD6-209ENST00000512466 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 TGFBRAP1Q8WUH2 860 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 CNOT6LQ96LI5 555 aaKnown RBP11.87□□□□□ -0.51
PDCD6-209ENST00000512466 GPCPD1Q9NPB8 672 aa11.87□□□□□ -0.51
PDCD6-209ENST00000512466 MCM3P25205 808 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 PRDX5P30044 214 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 BEND6Q5SZJ8 279 aaPredicted RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 TICAM2Q86XR7 235 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 HAUS4Q9H6D7 363 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 TLDC2A0PJX2 215 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 ONECUT3O60422 494 aaPredicted RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 NBPF5PQ86XG9 351 aaPredicted RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 STAG2Q8N3U4 1231 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 SRBD1Q8N5C6 995 aaKnown RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 EHBP1Q8NDI1 1231 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 SLC4A9Q96Q91 983 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 NHEJ1Q9H9Q4 299 aaPredicted RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 BMP2KQ9NSY1 1161 aaPredicted RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 EIF3CLB5ME19 914 aaKnown RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 FCER1AP12319 257 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 CALML3P27482 149 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 PDE6BP35913 854 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 LLGL1Q15334 1064 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 DIXDC1Q155Q3 683 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 CFAP58Q5T655 872 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 LRP10Q7Z4F1 713 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 CEP57Q86XR8 500 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 KSR1Q8IVT5 923 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 FAM71BQ8TC56 605 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 KIFC2Q96AC6 838 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 SPAG5Q96R06 1193 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 EIF3CQ99613 913 aaKnown RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 EHD4Q9H223 541 aa11.86□□□□□ -0.51
PDCD6-209ENST00000512466 PPANQ9NQ55 473 aaKnown RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 PACSIN2Q9UNF0 486 aaPredicted RBP11.86□□□□□ -0.51
PDCD6-209ENST00000512466 ATP8B1O43520 1251 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 FTCDO95954 541 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 PLEKP08567 350 aaPredicted RBP11.85□□□□□ -0.51
PDCD6-209ENST00000512466 ADGRA1Q86SQ6 560 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 TMEM139Q8IV31 216 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 RBM28Q9NW13 759 aaKnown RBP11.85□□□□□ -0.51
PDCD6-209ENST00000512466 SRCAPQ6ZRS2 3230 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 PPP1R3GB7ZBB8 358 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 H7C1D1 291 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 RPS6KA4O75676 772 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 CALM1P0DP23 149 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 CALM2P0DP24 149 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 CALM3P0DP25 149 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 ZNF18P17022 549 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 USP8P40818 1118 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 NFRKBQ6P4R8 1299 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 OTUD6BQ8N6M0 293 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 MB21D1Q8N884 522 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.85□□□□□ -0.51
PDCD6-209ENST00000512466 PPM1EQ8WY54 764 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 PLCD4Q9BRC7 762 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 FRMPD2Q68DX3 1309 aaPredicted RBP11.85□□□□□ -0.51
PDCD6-209ENST00000512466 ATRNO75882 1429 aa11.85□□□□□ -0.51
PDCD6-209ENST00000512466 ERVV-1B6SEH8 477 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 BAG6P46379 1132 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 VAV2P52735 878 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 EZH2Q15910 746 aaKnown RBP11.84□□□□□ -0.51
PDCD6-209ENST00000512466 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 PARP10Q53GL7 1025 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 POTEAQ6S8J7 498 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 SH2D3CQ8N5H7 860 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 MED15Q96RN5 788 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 LACRTQ9GZZ8 138 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 BACH1O14867 736 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 KCNJ6P48051 423 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 AMPD3Q01432 767 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 GUCY2DQ02846 1103 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 IFFO1Q0D2I5 559 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 PDCLQ13371 301 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 ZNF658Q5TYW1 1059 aaPredicted RBP11.84□□□□□ -0.51
PDCD6-209ENST00000512466 RSRC2Q7L4I2 434 aaKnown RBP11.84□□□□□ -0.51
PDCD6-209ENST00000512466 ZSCAN29Q8IWY8 852 aaPredicted RBP11.84□□□□□ -0.51
PDCD6-209ENST00000512466 LINC00116Q8NCU8 138 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 STAG1Q8WVM7 1258 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 ABCA3Q99758 1704 aa11.84□□□□□ -0.51
PDCD6-209ENST00000512466 FRMD3A2A2Y4 597 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms