RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 CD33P20138 364 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 TSPY1Q01534 308 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 GRB10Q13322 594 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 SLC9A5Q14940 896 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 E2F5Q15329 346 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 INTS11Q5TA45 600 aaKnown RBP7.33□□□□□ -1.24
CHD1-208ENST00000512392 RETSATQ6NUM9 610 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 RASGRP2Q7LDG7 609 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 MILR1Q7Z6M3 343 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 TTC16Q8NEE8 873 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 CENPTQ96BT3 561 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 CNTNAP3BQ96NU0 1288 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 CNTNAP3Q9BZ76 1288 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 SMOC1Q9H4F8 434 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 TBC1D22BQ9NU19 505 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 INTS7Q9NVH2 962 aaKnown RBP7.33□□□□□ -1.24
CHD1-208ENST00000512392 ZNRF3Q9ULT6 936 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 FAM170AA1A519 330 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 LRRC10BA6NIK2 292 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 PRKD3O94806 890 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 SNUPNO95149 360 aaKnown RBP7.32□□□□□ -1.24
CHD1-208ENST00000512392 MT-CO1P00395 513 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 CELA3AP09093 270 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 CYP2C19P33261 490 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 MAP2K3P46734 347 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 COPAP53621 1224 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 SRSF11Q05519 484 aaKnown RBP7.32□□□□□ -1.24
CHD1-208ENST00000512392 ZNF460Q14592 562 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 HGSNATQ68CP4 663 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 HIBCHQ6NVY1 386 aaPredicted RBP7.32□□□□□ -1.24
CHD1-208ENST00000512392 FCHSD1Q86WN1 690 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 C7orf61Q8IZ16 206 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 PPM1KQ8N3J5 372 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 ARL6IP6Q8N6S5 226 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 LSM14AQ8ND56 463 aaKnown RBP7.32□□□□□ -1.24
CHD1-208ENST00000512392 OR6P1Q8NGX9 317 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 ATP6V1E2Q96A05 226 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 VTA1Q9NP79 307 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 GIMAP2Q9UG22 337 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 RABL2BQ9UNT1 228 aa7.32□□□□□ -1.24
CHD1-208ENST00000512392 ERC2O15083 957 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 KPNA6O60684 536 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 TMEM127O75204 238 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 APBA3O96018 575 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 LTFP02788 710 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 APPP05067 770 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 BMP4P12644 408 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 HSD3B1P14060 373 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 IDEP14735 1019 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 NEK4P51957 841 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 PKN2Q16513 984 aaKnown RBP7.31□□□□□ -1.24
CHD1-208ENST00000512392 RTL10Q7L3V2 364 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 WAPLQ7Z5K2 1190 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 MYLK4Q86YV6 388 aaPredicted RBP7.31□□□□□ -1.24
CHD1-208ENST00000512392 TAB3Q8N5C8 712 aaPredicted RBP7.31□□□□□ -1.24
CHD1-208ENST00000512392 MYCT1Q8N699 235 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 SPATA5Q8NB90 893 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 GCC1Q96CN9 775 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 ZBTB10Q96DT7 871 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 EFCC1Q9HA90 598 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 BRMS1Q9HCU9 246 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 PTPN22Q9Y2R2 807 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 RTCBQ9Y3I0 505 aaKnown RBP7.31□□□□□ -1.24
CHD1-208ENST00000512392 C2CD2LO14523 706 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 NCAM2O15394 837 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 IL33O95760 270 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 NAT1P18440 290 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 RHCEP18577 417 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 RHDQ02161 417 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 CACNB2Q08289 660 aaPredicted RBP7.31□□□□□ -1.24
CHD1-208ENST00000512392 SKOR2Q2VWA4 1001 aaPredicted RBP7.31□□□□□ -1.24
CHD1-208ENST00000512392 INAVAQ3KP66 663 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 ZC3H12BQ5HYM0 836 aaKnown RBP7.31□□□□□ -1.24
CHD1-208ENST00000512392 CHST15Q7LFX5 561 aaPredicted RBP7.31□□□□□ -1.24
CHD1-208ENST00000512392 TTC6Q86TZ1 520 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 BRSK2Q8IWQ3 736 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 SLFN12Q8IYM2 578 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 TTC1Q99614 292 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 CARD10Q9BWT7 1032 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 WDR12Q9GZL7 423 aaKnown RBP7.31□□□□□ -1.24
CHD1-208ENST00000512392 SUV39H2Q9H5I1 410 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 VPS45Q9NRW7 570 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 CRYL1Q9Y2S2 319 aa7.31□□□□□ -1.24
CHD1-208ENST00000512392 WIPF1O43516 503 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 CCND1P24385 295 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 GRNP28799 593 aaKnown RBP7.3□□□□□ -1.24
CHD1-208ENST00000512392 IL6STP40189 918 aaPredicted RBP7.3□□□□□ -1.24
CHD1-208ENST00000512392 ZNF132P52740 706 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 KIF22Q14807 665 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 CDCA2Q69YH5 1023 aaPredicted RBP7.3□□□□□ -1.24
CHD1-208ENST00000512392 FAAH2Q6GMR7 532 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 B3GNT9Q6UX72 402 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 CCDC138Q96M89 665 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 FAM167BQ9BTA0 163 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 ABCG4Q9H172 646 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 PDP2Q9P2J9 529 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 TTLL3Q9Y4R7 772 aa7.3□□□□□ -1.24
CHD1-208ENST00000512392 M0R2C6 588 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 AREL1O15033 823 aa7.29□□□□□ -1.24
CHD1-208ENST00000512392 MTHFD1P11586 935 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms